Pairwise Alignments

Query, 367 a.a., outer membrane porin protein C (NCBI) from Escherichia coli BW25113

Subject, 378 a.a., Outer membrane protein C precursor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  604 bits (1557), Expect = e-177
 Identities = 303/384 (78%), Positives = 325/384 (84%), Gaps = 23/384 (5%)

Query: 1   MKVKVLSLLVPALLVAGAANAAEVYNKDGNKLDLYGKVDGLHYFSDNKDVDGDQTYMRLG 60
           MKVKVLSLLVPALLVAGAANAAE+YNKDGNKLDL+GKVDGLHYFSD+K  DGDQTYMR+G
Sbjct: 1   MKVKVLSLLVPALLVAGAANAAEIYNKDGNKLDLFGKVDGLHYFSDDKGSDGDQTYMRIG 60

Query: 61  FKGETQVTDQLTGYGQWEYQIQGNSAENENNSWTRVAFAGLKFQDVGSFDYGRNYGVVYD 120
           FKGETQV DQLTGYGQWEYQIQGN  E  N+SWTRVAFAGLKF D GSFDYGRNYGV YD
Sbjct: 61  FKGETQVNDQLTGYGQWEYQIQGNQTEGSNDSWTRVAFAGLKFADAGSFDYGRNYGVTYD 120

Query: 121 VTSWTDVLPEFGGDTYGSDNFMQQRGNGFATYRNTDFFGLVDGLNFAVQYQGKNGNPSGE 180
           VTSWTDVLPEFGGDTYG+DNFMQQRGNG+ATYRNTDFFGLVDGL+FA+QYQGKNG+ SGE
Sbjct: 121 VTSWTDVLPEFGGDTYGADNFMQQRGNGYATYRNTDFFGLVDGLDFALQYQGKNGSVSGE 180

Query: 181 GFTSGVTNNGRDALRQNGDGVGGSITYDY-EGFGIGGAISSSKRTDAQNTAA---YIGNG 236
                   NGR  L QNGDG GGS+TY   EGF +GGAI++SKRT  QN  A     GNG
Sbjct: 181 ------NTNGRSLLNQNGDGYGGSLTYAIGEGFSVGGAITTSKRTADQNNTANARLYGNG 234

Query: 237 DRAETYTGGLKYDANNIYLAAQYTQTYNATRVG---------SLGWANKAQNFEAVAQYQ 287
           DRA  YTGGLKYDANNIYLAAQY+QTYNATR G         S G+ANKAQNFE VAQYQ
Sbjct: 235 DRATVYTGGLKYDANNIYLAAQYSQTYNATRFGTSNGSNPSTSYGFANKAQNFEVVAQYQ 294

Query: 288 FDFGLRPSLAYLQSKGKNLGRG----YDDEDILKYVDVGATYYFNKNMSTYVDYKINLLD 343
           FDFGLRPS+AYLQSKGK++  G    Y D+DI+KYVDVGATYYFNKNMSTYVDYKINLLD
Sbjct: 295 FDFGLRPSVAYLQSKGKDISNGYGASYGDQDIVKYVDVGATYYFNKNMSTYVDYKINLLD 354

Query: 344 DNQFTRDAGINTDNIVALGLVYQF 367
            N FTRDAGINTD+IVALGLVYQF
Sbjct: 355 KNDFTRDAGINTDDIVALGLVYQF 378