Pairwise Alignments

Query, 547 a.a., fused predicted multidrug transport subunits of ABC superfamily: membrane component/ATP-binding component (NCBI) from Escherichia coli BW25113

Subject, 555 a.a., Lipid A export permease/ATP-binding protein MsbA from Variovorax sp. SCN45

 Score =  107 bits (267), Expect = 1e-27
 Identities = 125/506 (24%), Positives = 222/506 (43%), Gaps = 41/506 (8%)

Query: 58  LLLLMAVT----LGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQLGSASLLAGLTS 113
           +LLL AV       SQ AL+ + +  + +LR    +R+L   +    +  +++L   +  
Sbjct: 36  VLLLFAVRGIAQFISQYALSRIANEGMQKLRRVMFERLLGAELALFTRQSASALSNTVVY 95

Query: 114 DVRNITIAFVR-LPELVQGIILTIGSAAYLWMLSGKMLLVTAIWMAITIWGGFVLVARVY 172
           +V+   +  V+ L  L +     I    YL  L+ K+ L+ A  +    W   V   R+Y
Sbjct: 96  EVQTGAMLLVQALLGLSRDGFTLIALLGYLVYLNWKLTLIVAFLVPSISWIMKVFSKRLY 155

Query: 173 KHMATLRETEDKL-YTDFQTVLEGRKELTLNRERAEYVFNNLYIPDAQEYRHHIIRADTF 231
           +     ++  D+L Y   + VL  R    +    AE      +   +Q      +++   
Sbjct: 156 RLTQQGQQATDELAYVVEENVLAHR---VVRLHGAEGAQGRRFEQLSQRLNRLAVKSTIA 212

Query: 232 HLSAVNWSNIMMLGAIGLV----FWMANSLGWADTNVAATYSLTLLFLRTPL--LSAVGA 285
             +    + +M   A+ +V     W +   G+      A Y   +L L  P+  L+ V  
Sbjct: 213 QAATTPLTQMMASLALSVVVMIALWQSGKQGFTVGGFVA-YITAMLMLIAPIRRLAEVAG 271

Query: 286 -----LPTLLTAQVAFNKLNKFALAPFKAEFPRPQAFPNWQTLELRNVTFAYQ--DNAFS 338
                L  L    V  +++   +   F+ E    +       +ELRNV  +Y+  D   +
Sbjct: 272 PITRGLAALERGLVLIDEVAPESQGTFRIEHAEGR-------IELRNVQVSYRGDDEQRA 324

Query: 339 VGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSGEQPEDYRKL 398
           +  +NLTI+ G+++  +G +GSGK+TL  LL    QP SG++LLDG   S  + +  R  
Sbjct: 325 LDGVNLTIEPGQVVAFVGPSGSGKTTLVNLLPRFVQPSSGQVLLDGHDTSEWELKSLRAQ 384

Query: 399 FSAVFTDVWLFDQLLGPE---GKPANPQLVEKWLAQLKMAHKLE-LSNGRIVNL-----K 449
           F+ V  DV + ++ L      G   + + V + +    ++  +E L  G    L     +
Sbjct: 385 FAMVSQDVVMLNETLAANVALGSEIDRERVLQCIDAANLSSHVENLPQGIDTVLGHNATQ 444

Query: 450 LSKGQKKRVALLLALAEERDIILLDEWAADQDPHFRREFYQVLLPLMQEMGKTIFAISHD 509
           LS GQ++R+A+  AL +   ++LLDE  +  D    R     L  LMQ   +T   ++H 
Sbjct: 445 LSGGQRQRLAIARALYKNAPVLLLDEATSALDTESERLVQDALQRLMQ--NRTTLIVAHR 502

Query: 510 DHYFIHADRLLEMRNGQLSELTGEER 535
                HADR++ M  G+++E    E+
Sbjct: 503 LSTIQHADRIIVMEQGRIAEQGSHEQ 528