Pairwise Alignments

Query, 547 a.a., fused predicted multidrug transport subunits of ABC superfamily: membrane component/ATP-binding component (NCBI) from Escherichia coli BW25113

Subject, 573 a.a., Transport ATP-binding protein CydC from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  110 bits (274), Expect = 2e-28
 Identities = 144/564 (25%), Positives = 243/564 (43%), Gaps = 62/564 (10%)

Query: 7   VWRQYRWPFISVMALSLASAALGIGLIAFINQRLIETADTSLLVLPEFLGLLLLLMAVTL 66
           ++++++W     +AL++ +    IGL+      L  +A      +  F     +L A  +
Sbjct: 10  LYKRHKWMLTLGIALAILTLLASIGLLTLSGWFLSASAIAGFAGIYSFN---YMLPAAGV 66

Query: 67  GSQLALTTLGHHFVYRLRSEFIKRILDTHVE-----RIEQLGSASLLAGLTSDVRNITIA 121
                  T G +F   +  +   R+L  H+      ++  L  ASL      ++ N  +A
Sbjct: 67  RGAAITRTAGRYFERLVSHDATFRVLQ-HLRIYTFSKLLPLSPASLARYQQGELLNRIVA 125

Query: 122 FV-RLPELVQGIILTIGSAAYLWMLSGKMLLVTAIWMAITIWGGFVLVA---------RV 171
            V  L  L   +I  +  A  + M+    L V  + +AIT+ GG +L+          R 
Sbjct: 126 DVDTLDHLYLRVISPLVGAFVVIMIVTLGLSVLDVTLAITL-GGIMLLTLFIMPPVFYRA 184

Query: 172 YKHMA-TLRETEDKLYTDFQTVLEGRKELTL----NRERAEYVFNNLYIPDAQEYRHHII 226
            K+    L     +      + L+G+ ELT+     R RA+         +A E + H  
Sbjct: 185 GKNTGQNLTHLRGQYRQQLTSWLQGQAELTIFGASKRYRAQM--------EATELQWHEA 236

Query: 227 RADTFHLSAVNWSNIMMLGAIG--LVFWMANSLGWADTNVAATYSLTL---LFLRTPLLS 281
           +     L+A++ + ++++GA+   L+ WMA+     +T   A  +L +   L     L  
Sbjct: 237 QRRQSELTALSQALMLLIGALAVMLMLWMASGGVGGNTQPGALIALFVFCALAAFEALAP 296

Query: 282 AVGALPTLLTAQVAFNKLNKFALAPFKAEFPRPQA---FPNWQTLELRNVTFAYQDNAFS 338
             GA   L   QV  + L    L   K E   PQA    P   TL LR+V+F Y D   +
Sbjct: 297 VTGAFQHL--GQVIASALRITELTEQKPEVTFPQAETPAPEKVTLTLRDVSFRYPDQPIN 354

Query: 339 -VGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSGEQPEDYRK 397
            +  ++L    GE + ++G  G GKSTL  LLT  + PQ GEILL+  P+S       R+
Sbjct: 355 ALNALSLQANPGEHVAILGRTGCGKSTLLQLLTRAWDPQQGEILLNDLPLSSLSESALRR 414

Query: 398 LFSAVFTDVWLFDQLLGPE----GKPANPQLVEKWLAQLKMAHKLELS--------NGRI 445
             S V   V LF   L          A+ + +   L ++ + + LE S         GR+
Sbjct: 415 TISVVPQRVHLFSATLRDNLLLAAPNASDEALSDMLRRVGLENLLEDSGLNSWLGEGGRL 474

Query: 446 VNLKLSKGQKKRVALLLALAEERDIILLDEWAADQDPHFRREFYQVLLPLMQEMGKTIFA 505
               LS G+ +R+A+  AL  +  ++LLDE     D     E  ++L  +M+E  KT+  
Sbjct: 475 ----LSGGELRRLAIARALLHDAPLMLLDEPTEGLDATTESEMLELLADVMRE--KTVLM 528

Query: 506 ISHDDHYFIHADRLLEMRNGQLSE 529
           ++H        D+++ M +G + E
Sbjct: 529 VTHRLRGLARFDQIIVMDDGHIIE 552