Pairwise Alignments

Query, 828 a.a., nitrate reductase, periplasmic, large subunit (NCBI) from Escherichia coli BW25113

Subject, 930 a.a., Assimilatory nitrate reductase large subunit (EC 1.7.99.4) from Variovorax sp. SCN45

 Score =  329 bits (843), Expect = 5e-94
 Identities = 238/805 (29%), Positives = 363/805 (45%), Gaps = 117/805 (14%)

Query: 43  KAPCRFCGTGCGVLVGTQQGRVVACQGDPDAPVNRGLNCIKGYFL----PKIMYGKDRLT 98
           ++ C +CG GCGV++ +    +   +GDP+ P N G  C KG  L       +  + RL 
Sbjct: 5   RSTCPYCGVGCGVIIESHGDEITGVRGDPEHPANFGRLCTKGSTLHLTASATVTRQTRLL 64

Query: 99  QPLLRMKNGKYDKEGEFTPITWDQAFDVMEEKFKTALKEKGPESIGMFGSGQWTIWEGYA 158
           QP+ R+   +       T +TWD A D    KF   +++ GP+S+G + SGQ    + Y 
Sbjct: 65  QPMQRIVRREAP-----TVVTWDTALDNAAGKFAQVIRDHGPDSVGFYVSGQLLTEDYYV 119

Query: 159 ASKLFKAGFRSNNIDPNARHCMASAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGANMAE 218
            +KL K    +NNID N+R CM+SAV G+ +T G D P  CYDD++ A   ++ G+N A 
Sbjct: 120 FNKLAKGLIGTNNIDTNSRLCMSSAVAGYKQTLGADAPPACYDDLKHAQCILIVGSNTAW 179

Query: 219 MHPILWSRITNRRLSNQNVTVAVLSTYQHRSFELADNGIIFTPQSDLVILNYIANYIIQN 278
            HPIL+ R+ + + +N  + + V    +  + E+AD  +   P +D+++ N + + ++  
Sbjct: 180 AHPILFRRLEDAKAANPALKIVVADPRRTDTAEIADLFLPIQPGTDVMLFNGMLHLMLWE 239

Query: 279 NAINQDFFSKHVNLRKGATDIGYGLRPTHPLEKAAKNPGSDASEPMSFEDYKAFVAEYTL 338
             ++  + + H N                                  F+  KA V E T 
Sbjct: 240 GWMDAKYIAAHTN---------------------------------GFDALKATVRECTP 266

Query: 339 EKTAEMTGVPKDQLEQLAQLYADPNKKVISYWTMGFNQHTRGVWANNLVYNLHLLTGKIS 398
           +K A++ GV K+ L + A+L+A  +   +S +  G NQ + G   N  + NLHL T +I 
Sbjct: 267 DKVAQVCGVSKEDLLEAARLFAT-SPATLSLYCQGLNQSSSGTAKNAALINLHLATAQIG 325

Query: 399 QPGCGPFSLTGQPSACGTAREVGTFAHRLPADMVVTNEKHRDICEKKWNIPSGTIPAKIG 458
           +PG GPFSLTGQP+A G  REVG  A+ L A   + N  HR      W +PS  +P K G
Sbjct: 326 KPGAGPFSLTGQPNAMG-GREVGGLANLLSAHRDLANPDHRAEVAALWGVPS--VPEKPG 382

Query: 459 LHAVAQDRALKDGKLNVYWTMCTNNMQAGPNINEERMPGWRDPRNFIIVSDPYPTVSALA 518
             AV   +A  DG++   W  CTN  Q+ P+    R     +   F++V + + T +  A
Sbjct: 383 KTAVEMFQAAADGEIRALWIACTNPAQSMPDQATVRRA--LERAEFVVVQEAFATTATCA 440

Query: 519 -ADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKSDLWQLVQFSRRFKTEEVWPE 577
            ADL+LP   W EKEG   N+ERR    R  V APG A++D    V F+ R + +     
Sbjct: 441 FADLLLPATTWGEKEGTVTNSERRISRVRPAVPAPGAARNDWSIAVAFAHRLERQ----- 495

Query: 578 DLLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLNDESRELGFYLQKGLFEEYAWFG 637
                     G+      Y T E                            ++ E+    
Sbjct: 496 ---------MGRAFTLFPYETAE---------------------------SVWNEHREST 519

Query: 638 RGHGHDLA--PFDDYHKARGLRWPVVNGKET--QWRYSEGNDPYVKAGEGYKFYGKPDGK 693
           RG   D+    +     A   +WP+  G+ T     Y +G  P             PDG+
Sbjct: 520 RGRDLDITGMSYAMLETAGPQQWPLKEGESTGRARLYEDGVFP------------TPDGR 567

Query: 694 AVIFALPFEPAAEAPDEEYDLWLSTGRVLEHWHTGSMTRRVPELHRAFPEAVLFIHPLDA 753
           A      ++P AEA +  Y   L+TGR+ + WH  S T     L    PE V+ ++  D 
Sbjct: 568 ARFVDTIYKPVAEAREARYPFSLNTGRLRDQWHGMSRTGTAGRLFGHVPEPVVQMNAQDM 627

Query: 754 KARDLRRGDKVKVVSRRGEVISIVETRGRNRPPQGLVYMPF---------FDAAQL--VN 802
             R +R GD V + SRRG ++            Q  V M +          +  +L  +N
Sbjct: 628 ARRQIREGDLVHLTSRRGSIMLPARASAEVGLSQAFVAMHWGEEYLSGCSSNGTRLAGIN 687

Query: 803 KLTLDATDPLSKETDFKKCAVKLEK 827
            LT  A  P SK+ + K   VK+ K
Sbjct: 688 ALTTPAFCPTSKQPELKHTPVKILK 712