Pairwise Alignments

Query, 336 a.a., beta-methylgalactoside transporter inner membrane component (NCBI) from Escherichia coli BW25113

Subject, 330 a.a., ribose ABC transporter permease from Pseudomonas simiae WCS417

 Score =  195 bits (496), Expect = 1e-54
 Identities = 116/314 (36%), Positives = 173/314 (55%), Gaps = 19/314 (6%)

Query: 19  YVVLLVLLAIIIFQDPTFLSLLNLSNILTQSSVRIIIALGVAGLIVTQGTDLSAGRQVGL 78
           +V L+V+  ++I    TFL+  NLSNI  Q S+  IIA+G+  +I+T G DLS G  + L
Sbjct: 35  FVGLVVVTLVMILASDTFLTASNLSNIARQVSINAIIAVGMTCVILTGGIDLSVGPVMAL 94

Query: 79  AAVVAATLLQSMDNANKVFPEMATMPIALVILIVCAIGAVIGLINGLIIAYLNVTPFITT 138
           +  + A L+            +A +P  L I     IG   G+ NGL +AYL++ P I T
Sbjct: 95  SGTLTAGLM------------VAGLPPGLAIGAGMLIGVAFGIGNGLFVAYLHMPPIIVT 142

Query: 139 LGTMIIVYGINSLYYDFVGASPISGFDSGFSTFAQGFVALGSFRLSYITFYALIAVAFVW 198
           L TM I  G+  +Y D     PISG    F+ F +  +    F +       L+     +
Sbjct: 143 LATMGIARGLGLMYTD---GYPISGLPDWFAFFGRESL----FGIQVPILIMLLTYLVAY 195

Query: 199 VLWNKTRFGKNIFAIGGNPEAAKVSGVNVGLNLLMIYALSGVFYAFGGMLEAGRIGSATN 258
           VL   TR G+ I+AIGGN EA ++SGV      L++Y +SG+  A  G++   R+ S   
Sbjct: 196 VLLQHTRIGRYIYAIGGNEEAVRLSGVRAARFKLLVYGISGLTAAIAGLVLTSRLMSGQP 255

Query: 259 NLGFMYELDAIAACVVGGVSFSGGVGTVIGVVTGVIIFTVINYGLTYIGVNPYWQYIIKG 318
           N G  +ELDAIAA V+GG S +GG G ++G + G ++  V+N GL  +GV+PY Q +IKG
Sbjct: 256 NAGVSFELDAIAAVVLGGASIAGGRGVIVGTLLGAMLLGVLNNGLNMLGVSPYVQSVIKG 315

Query: 319 AIIIFAVALDSLKY 332
            II+ A+ +   ++
Sbjct: 316 GIILLAIFISRQRH 329