Pairwise Alignments

Query, 336 a.a., beta-methylgalactoside transporter inner membrane component (NCBI) from Escherichia coli BW25113

Subject, 340 a.a., Inositol transport system permease protein (from data) from Pseudomonas simiae WCS417

 Score =  200 bits (508), Expect = 5e-56
 Identities = 110/307 (35%), Positives = 181/307 (58%), Gaps = 13/307 (4%)

Query: 30  IFQDPTFL-SLLNLSNILTQSSVRIIIALGVAGLIVTQGTDLSAGRQVGLAAVVAATLLQ 88
           I +D +FL +   L  ++ Q S+  ++A+GV  +I+T G DLS+G  + L+A++AA+L Q
Sbjct: 43  IVRDQSFLMNSQRLVLMILQVSIIGLLAIGVTQVIITTGIDLSSGSVLALSAMIAASLAQ 102

Query: 89  SMDNANKVFPEMATMPIALVILIVCAIGAVIGLINGLIIAYLNVTPFITTLGTMIIVYGI 148
           + D +  VFP +  +P+ + + +   +G + G ING IIA   + PFI TLG M+   G+
Sbjct: 103 TSDFSRAVFPSLTDLPVWIPVAMGLGVGLLAGAINGSIIAVTGIPPFIATLGMMVSARGL 162

Query: 149 NSLYYDFVGASPISGFDSGFSTFAQGFVALGSFRLSYITFYALIAVAFVWVLWNKTRFGK 208
              Y +     P+S     ++    G + +  F +  + F+  IA+ +       T++GK
Sbjct: 163 ARYYTE---GQPVSMLSDSYTAIGHGAMPVIIFLVVAVIFH--IALRY-------TKYGK 210

Query: 209 NIFAIGGNPEAAKVSGVNVGLNLLMIYALSGVFYAFGGMLEAGRIGSATNNLGFMYELDA 268
             +AIGGN +AA+ SG+NV  +L+++Y+++G+     G++ + R  +    +G  YELDA
Sbjct: 211 YTYAIGGNMQAARTSGINVKRHLIIVYSIAGLLAGLAGVVASARAATGQAGMGMSYELDA 270

Query: 269 IAACVVGGVSFSGGVGTVIGVVTGVIIFTVINYGLTYIGVNPYWQYIIKGAIIIFAVALD 328
           IAA V+GG S +GGVG + G V G +I  V+  G T++GV+ Y Q IIKG II+ AV +D
Sbjct: 271 IAAAVIGGTSLAGGVGRITGTVIGALILGVMASGFTFVGVDAYIQDIIKGLIIVVAVVID 330

Query: 329 SLKYARK 335
             +  RK
Sbjct: 331 QYRNKRK 337