Pairwise Alignments

Query, 336 a.a., beta-methylgalactoside transporter inner membrane component (NCBI) from Escherichia coli BW25113

Subject, 321 a.a., Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  194 bits (492), Expect = 3e-54
 Identities = 117/323 (36%), Positives = 185/323 (57%), Gaps = 21/323 (6%)

Query: 12  YLKEGGIYVVLLVLLAIIIFQDPTFLSLLNLSNILTQSSVRIIIALGVAGLIVTQGTDLS 71
           +L E    + LLVL+AI+    P F ++ NL NIL Q+SV  I+A+G+  +I+T G DLS
Sbjct: 16  WLLEQKSLIALLVLIAIVSTLSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSGIDLS 75

Query: 72  AGRQVGLAAVVAATLLQSMDNANKVFPEMATMPIALVILIVCAIGAVIGLINGLIIAYLN 131
            G  + L   VAA+++    NA             + +    A+GA IG + G+I+A   
Sbjct: 76  VGSLLALTGAVAASIVGVEVNA------------LVAVAAALALGAAIGAVTGVIVAKGR 123

Query: 132 VTPFITTLGTMIIVYGINSLYYDFVGASPISGFDSGFSTFAQGFVALGSFR-LSYITFYA 190
           V  FI TL  M+++ G+  +Y D    SP++   +GF+  A  F   G  R L   T   
Sbjct: 124 VQAFIATLVMMLLLRGVTMVYTD---GSPVN---TGFTDNADLFGWFGIGRPLGVPTPVW 177

Query: 191 LIAVAFV--WVLWNKTRFGKNIFAIGGNPEAAKVSGVNVGLNLLMIYALSGVFYAFGGML 248
           ++A+ F+  W + + TR G+ I+A+GGN  A ++SG++V    +++Y+L G+  +  G++
Sbjct: 178 IMAIVFIAAWYMLHHTRLGRYIYALGGNEAATRLSGISVSKVKIIVYSLCGLTASLAGII 237

Query: 249 EAGRIGSATNNLGFMYELDAIAACVVGGVSFSGGVGTVIGVVTGVIIFTVINYGLTYIGV 308
           E  R+ SA    G  YELDAIAA V+GG S +GG G ++G + G +I   +N GL  +GV
Sbjct: 238 EVARLSSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGV 297

Query: 309 NPYWQYIIKGAIIIFAVALDSLK 331
           + Y+Q I+K  +I+ AV +D+ K
Sbjct: 298 SSYYQMIVKAVVILLAVLVDNKK 320