Pairwise Alignments

Query, 315 a.a., tRNA-dihydrouridine synthase C (NCBI) from Escherichia coli BW25113

Subject, 325 a.a., tRNA-dihydrouridine synthase C from Pseudomonas simiae WCS417

 Score =  253 bits (646), Expect = 4e-72
 Identities = 133/312 (42%), Positives = 195/312 (62%), Gaps = 6/312 (1%)

Query: 1   MRVLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTP 60
           M++ LAPMEG++D+++R++LT V   D C+TEF+RV D+LL    FH++ PEL + + T 
Sbjct: 1   MQIALAPMEGLVDNILRDVLTRVGGIDWCVTEFIRVNDRLLTPAYFHKLAPELLHGAHTA 60

Query: 61  SGTLVRVQLLGQFPQWLAENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIY 120
           +G  +RVQLLG  P  LAENAA A ELGS  +DLN GCP+KTVN S GGA LLK+PEL+ 
Sbjct: 61  AGVPLRVQLLGSDPVCLAENAALACELGSQVIDLNFGCPAKTVNKSRGGAVLLKEPELLN 120

Query: 121 QGAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAVQQAGATELVVHGRTKEQGYRAEH 180
           Q  + +R AVPAH+PV+ K+RLG+DS +     A A+ + GA  +VVH RTK  GY+   
Sbjct: 121 QIVEHVRRAVPAHIPVTAKMRLGFDSPDGALVCATALAEGGAAHIVVHARTKTDGYKPP- 179

Query: 181 IDWQAIGDIRQRLNIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIPNLSRVVKYN 240
             W+ I  +++ + +PV ANG+IW  +  ++C  +SG + +M+GRG +  P+L+R +   
Sbjct: 180 AHWEWIPRVQEVVKVPVFANGDIWSVEDWKRCREVSGAEDIMLGRGLVARPDLARQIAAA 239

Query: 241 EP-----RMPWPEVVALLQKYTRLEKQGDTGLYHVARIKQWLSYLRKEYDEATELFQHVR 295
                   M W E+  +LQ++        T      R+KQWL+ L + Y EA ELF  +R
Sbjct: 240 RAGEEVVEMTWAEMQPMLQEFWTQSVAQLTERQAPGRLKQWLAMLTRNYPEAVELFTLMR 299

Query: 296 VLNNSPDIARAI 307
              +   + R +
Sbjct: 300 RETDLEQVGRLL 311