Pairwise Alignments

Query, 315 a.a., tRNA-dihydrouridine synthase C (NCBI) from Escherichia coli BW25113

Subject, 329 a.a., tRNA dihydrouridine synthase DusB from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  113 bits (283), Expect = 5e-30
 Identities = 94/293 (32%), Positives = 142/293 (48%), Gaps = 28/293 (9%)

Query: 3   VLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTPSG 62
           +LLAPME V D   R++  + N  DL  TEF+          +       +Q        
Sbjct: 14  LLLAPMEDVSDPPFRKVC-KANGADLMYTEFISSEG------LIRDAAKSVQKLDIFDYE 66

Query: 63  TLVRVQLLGQFPQWLAENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKD-PELIYQ 121
             + +Q+ G   + + E A  + + G   +D+N GCP K V   G GA LL+D P+++  
Sbjct: 67  RPIGIQIFGSDIESMREAAIVSAQAGPDLIDINYGCPVKNVACKGAGAALLRDVPKMV-- 124

Query: 122 GAKAMREAVPA-HLPVSVKVRLGWDSGEKKF-EIADAVQQAGATELVVHGRTKEQGYRAE 179
             K   E V A +LPV+VK RLGWD   K   E A+ +Q  G   L +HGRT+ Q Y+ E
Sbjct: 125 --KMTEEIVKATNLPVTVKTRLGWDENTKYIVETAERLQDIGIKALSIHGRTRVQMYKGE 182

Query: 180 HIDWQAIGDIRQ--RLNIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIPNLSRVV 237
             DW  I +++   R+ IP+  NG+I   Q A +     G D +MIGR ++  P +   +
Sbjct: 183 -ADWSLIAEVKNNPRMQIPIFGNGDIDSPQKALEYRNRYGVDGIMIGRASIGYPWIFNEI 241

Query: 238 KY---NEPRMPWP----EVVALLQKYTR-LEKQGD-TGLYHVARIKQWLSYLR 281
           K+       +P P     V    Q +T  LE +GD  G++ + R   + +Y R
Sbjct: 242 KHYMKTGEILPGPTLEERVEVCRQHFTHSLEWKGDKLGIFEMRR--HYTNYFR 292