Pairwise Alignments

Query, 308 a.a., predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) from Escherichia coli BW25113

Subject, 379 a.a., ABC transporter ATP-binding protein from Erwinia tracheiphila SCR3

 Score =  219 bits (559), Expect = 6e-62
 Identities = 114/251 (45%), Positives = 162/251 (64%), Gaps = 6/251 (2%)

Query: 1   MIEFSHVSKLFGAQK-----AVNDLNLNFQEGSFSVLIGTSGSGKSTTLKMINRLVEHDS 55
           MI+  ++++ F  +      AV++++LN  EG   +L+G SG GKSTTLKMINRL+   S
Sbjct: 1   MIKLENLTRTFTQENGTTINAVDNVSLNVPEGEMCILLGPSGCGKSTTLKMINRLILSTS 60

Query: 56  GEIRFAGEEIRSLPVLELRRRMGYAIQSIGLFPHWSVAQNIATVPQLQKWSRARIDDRID 115
           G+I   GE+   L  + LRR +GY IQ IGLFP+ ++ +NI  V ++  W +     R  
Sbjct: 61  GKILINGEDTSELDTVALRRNIGYVIQQIGLFPNMTIEENITVVSKMLGWDKKHCHVRAS 120

Query: 116 ELMALLGLE-SNLRERYPHQLSGGQQQRVGVARALAADPQVLLMDEPFGALDPVTRGALQ 174
           ELM++L L+  +   RYP ++SGGQQQR+GV RALAADP VLLMDEPFGA+D + R  +Q
Sbjct: 121 ELMSMLALDPKSFLHRYPREMSGGQQQRIGVIRALAADPPVLLMDEPFGAVDQINREVIQ 180

Query: 175 QEMTRIHRLLGRTIVLVTHDIDEALRLAEHLVLMDHGEVVQQGNPLTMLTRPANDFVRQF 234
            E   + R L +T++LV+HDIDEAL+L + + + D  ++VQ  +P  +L  P NDFV  F
Sbjct: 181 NEFLDMQRQLKKTVMLVSHDIDEALKLGDRIAVFDQEKIVQCASPDELLATPRNDFVGSF 240

Query: 235 FGRSELGVRLL 245
            G+     RLL
Sbjct: 241 VGQDRTLKRLL 251