Pairwise Alignments

Query, 245 a.a., flagellar biosynthesis protein P (NCBI) from Escherichia coli BW25113

Subject, 222 a.a., type III secretion system export apparatus subunit SctR from Paraburkholderia sabiae LMG 24235

 Score =  157 bits (397), Expect = 2e-43
 Identities = 85/212 (40%), Positives = 130/212 (61%), Gaps = 9/212 (4%)

Query: 41  PVQTLVFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFI 100
           PV  +  I +L   P   LM+TS+T++++V GLLR+ALG    PPN VL G+AL L+ FI
Sbjct: 7   PVSLIAVIVALGIAPFAALMVTSYTKLVVVLGLLRSALGIQQVPPNMVLNGIALILSLFI 66

Query: 101 MSPV----IDKIYVDAYQPFSEEKISMQEALEKGA-QPLREFMLRQTREADLGLFARLAN 155
           M+PV     D +    + P  +   +   AL   A  P+++F+   TR  D   F + A 
Sbjct: 67  MAPVGMNIRDALQERNFNPSGQLSTADIGALADAALPPIKDFLTAHTRLRDRQFFVKTAT 126

Query: 156 T----GPLQGPEAVPMRILLPAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMM 211
           +       +G +   + +L+P++  +EL  AFQIGF I+I F+++DL++A++L+ALGM M
Sbjct: 127 SVWPKSRAEGLKDDDLLVLVPSFTLAELTKAFQIGFVIYIVFIVVDLLVANILLALGMQM 186

Query: 212 VPPATIALPFKLMLFVLVDGWQLLVGSLAQSF 243
           + P TI++PFKL+LFV +DGW LLV  L  S+
Sbjct: 187 ISPTTISVPFKLLLFVALDGWSLLVHGLVLSY 218