Pairwise Alignments

Query, 245 a.a., flagellar biosynthesis protein P (NCBI) from Escherichia coli BW25113

Subject, 270 a.a., flagellar type III secretion system pore protein FliP from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  212 bits (540), Expect = 5e-60
 Identities = 109/245 (44%), Positives = 160/245 (65%), Gaps = 5/245 (2%)

Query: 4   LLSVAPVLLWLITPLAF-----AQLPGITSQPLPGGGQSWSLPVQTLVFITSLTFIPAIL 58
           LLS+   L+ L  P+A      AQ     +  L  G       VQ +  +T L+  P+I+
Sbjct: 19  LLSLFTTLVCLAWPVAALAQQAAQSGSALNIDLGTGAGLTQRVVQLVGLMTVLSLAPSIV 78

Query: 59  LMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVIDKIYVDAYQPFSE 118
           +M TSF RII+V  LLR ALG   +PPN VL+ L+LFL+  +M+P     Y    +P  +
Sbjct: 79  IMTTSFVRIIVVLSLLRTALGLQQSPPNAVLVSLSLFLSAIVMAPTWQDAYDSGIRPLMD 138

Query: 119 EKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTGPLQGPEAVPMRILLPAYVTSE 178
           ++I + +A ++ ++P++ FML Q    DL LF RL+   P Q  + +P+R++ PA++ SE
Sbjct: 139 QQIELPQAFDQASEPVKTFMLAQVDRGDLALFTRLSKIDPPQNVQDLPLRVVTPAFMISE 198

Query: 179 LKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPATIALPFKLMLFVLVDGWQLLVGS 238
           LK AF+IGF +F+PFL+IDLV+ASVLM++GMMM+PP  ++LPFKL+ FVLVDGW+L+ GS
Sbjct: 199 LKKAFEIGFLLFVPFLVIDLVVASVLMSMGMMMLPPVVVSLPFKLIFFVLVDGWRLVAGS 258

Query: 239 LAQSF 243
           L +SF
Sbjct: 259 LVESF 263