Pairwise Alignments

Query, 228 a.a., flagellar biosynthesis; export of flagellar proteins? (VIMSS) from Escherichia coli BW25113

Subject, 245 a.a., flagellar assembly protein FliH from Dickeya dianthicola ME23

 Score =  269 bits (688), Expect = 3e-77
 Identities = 136/239 (56%), Positives = 166/239 (69%), Gaps = 14/239 (5%)

Query: 2   SDNLPWKTWTPDDLAPPQAEFVPIVEPEETIIEEAEPSLEQQ--------------LAQL 47
           S NL W+ W  DDL+ P+     +V P  +    +   LE                LA L
Sbjct: 5   SSNLDWQPWKLDDLSGPKPAVADVVTPSSSSPASSSARLEDNNFFGMSDFQQSEDDLATL 64

Query: 48  QMQAHEQGYQAGIAEGRQQGHKQGYQEGLAQGLEQGLAEAKSQQAPIHARMQQLVSEFQT 107
           + Q  +Q  + G  EG+QQG+  GYQ+G+  G +QGL +A  QQ P+ A+MQQ+V+EFQ 
Sbjct: 65  REQVLQQARENGFTEGKQQGYAAGYQDGIQAGTQQGLQDAAQQQQPVIAQMQQMVNEFQQ 124

Query: 108 TLDALDSVIASRLMQMALEAARQVIGQTPTVDNSALIKQIQQLLQQEPLFSGKPQLRVHP 167
           TLDALDSVI SRLMQ+AL AA+QVIGQ+P  D +AL+ QIQQL+QQEP+FSGKPQLRVHP
Sbjct: 125 TLDALDSVIVSRLMQLALTAAKQVIGQSPVCDGTALMGQIQQLIQQEPMFSGKPQLRVHP 184

Query: 168 DDLQRVDDMLGATLSLHGWRLRGDPTLHPGGCKVSADEGDLDASVATRWQELCRLAAPG 226
            DL RV+  LG TLSLHGWRL  D  LHPGGCKVSA+EGDLD+S+ATRW ELCRLAAPG
Sbjct: 185 SDLDRVEQHLGPTLSLHGWRLLADNQLHPGGCKVSAEEGDLDSSIATRWHELCRLAAPG 243