Pairwise Alignments

Query, 552 a.a., flagellar M-ring protein (NCBI) from Escherichia coli BW25113

Subject, 560 a.a., Flagellar M-ring protein FliF from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  180 bits (456), Expect = 1e-49
 Identities = 146/558 (26%), Positives = 262/558 (46%), Gaps = 66/558 (11%)

Query: 26  IVAGSAAVAVMVALILWAKAPDYRTLFSNLSDQDGGAIVSQLTQMNIPYRFSEASGAIEV 85
           +V  +  +  MV + LW     Y+ +F          +++ L    I YR    +G + V
Sbjct: 32  VVLLAIGITAMVMMFLWNDQASYKPVFGAREQVPVSDMMATLDAEGIGYRLHPETGQVLV 91

Query: 86  PADKVHELRLRLAQQGLPKGGAVGFELLDQ-EKFGISQFSEQVNYQRALEGELSRTIETI 144
            +  +  +R+ LA +G+      G EL+D+ +  G++QF + + ++R LEGEL ++I ++
Sbjct: 92  SSSDLGRVRMLLAAKGVTARLPEGLELMDKNDPLGVTQFVQDIRFRRGLEGELVQSITSM 151

Query: 145 GPVKGARVHLAMPKPSLFV-REQKSPSASVTVNLLPGRALDEGQISAIVHLVSSAVAGLP 203
             V+ ARVHL++ + S FV   Q   +ASV +NL PGR L   QI++I+ LV+ +V+ L 
Sbjct: 152 DAVRSARVHLSVARSSTFVLNAQDKSTASVVLNLHPGRTLGNEQIASIIQLVAGSVSNLD 211

Query: 204 PGNVTLVDQGGHLLTQ--SNTSGRDLNDAQLKYASDVEGRIQRRIEAILSPIVGNGNIHA 261
           P  V++VDQ G LL+       G D      + A   +  I +    +L P++G GN + 
Sbjct: 212 PSRVSVVDQAGRLLSARVDVKDGIDNGSFADEAARKAQNDILQNAHQLLQPLLGAGNYNV 271

Query: 262 QVTAQLDFASKEQTEEQYRPNGDESHAALRSRQLNESEQSGSGYPGGVPGALSNQPAPAN 321
            V  +L     ++T+E+Y   GD       + + +  E +      GVPG+LSN+PA   
Sbjct: 272 SVAVELGQDRVQETQERY---GDSPKV---TNEASREESNRDRVALGVPGSLSNRPA--- 322

Query: 322 NAPISTPPANQNNRQQQASTTSNSGPRSTQRNE-TSNYEVDRTIRHTKMNVGDVQRLSVA 380
                TP           +  +N+ P + +R+  T  +  DR++   +   G +++LSVA
Sbjct: 323 -----TP-----------APDANAAPNTAERSAVTRQFAYDRSVTTIQRARGQLKKLSVA 366

Query: 381 VVVNYKTLPDGKPLPLSNEQMKQIEDLTREAMGFSEKRGDSLNVVNSPFNSSDESGGELP 440
           VV+N    P G       +++ ++E L R  +G + +RGD L V    F  +  +   +P
Sbjct: 367 VVLNEGAAPGG-AASWGPQEIARMESLLRGGLGINAERGDQLVVSALAFPGAAPA---VP 422

Query: 441 FWQQQAFIDQLLAAGRWLLVLLVAWLLWRKAVRPQLTRR--------------------- 479
           ++ ++  + + +  G + L  L+A+LL  + +   L  R                     
Sbjct: 423 WYAERETVFEFVTWGLYALGALLAYLLLARPLLRLLRERNKPAAEIGMTDLIALEGGPGN 482

Query: 480 AEAMKAVQQQAQAREEVEDAVE-------VRLSKDEQLQQRRANQRLGAEVMSQRIREMS 532
           AE   A+ Q + A   + + V+       V L  D  L    +      EV+   ++ ++
Sbjct: 483 AEEAPALAQPSPAVAALPNKVQPSTSGAMVPLLADYDLPPPGS----PVEVLVNHLKVLA 538

Query: 533 DNDPRVVALVIRQWINND 550
             +P  VA V++QW+  +
Sbjct: 539 QKEPERVAEVVKQWVQKN 556