Pairwise Alignments

Query, 308 a.a., flagellar motor protein MotB (NCBI) from Escherichia coli BW25113

Subject, 351 a.a., flagellar motor protein MotB from Pectobacterium carotovorum WPP14

 Score =  380 bits (976), Expect = e-110
 Identities = 200/309 (64%), Positives = 240/309 (77%), Gaps = 6/309 (1%)

Query: 1   MKNQAHPIIVVKRRKAKSHGAAHG-SWKIAYADFMTAMMAFFLVMWLISISSPKELIQIA 59
           MK+Q HPII  KR+    HG  HG SWKIAYADFMTAMMA FLVMWLI+IS+P +L QIA
Sbjct: 1   MKHQ-HPIIRKKRKSG--HGGHHGGSWKIAYADFMTAMMALFLVMWLIAISTPMQLAQIA 57

Query: 60  EYFRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELKKRMEQSRLRKLR 119
           EYFRTPL  A+T G + S+S SPIPGGG+D TQ  GEV K    + ++K++++ RL +LR
Sbjct: 58  EYFRTPLKVALTSGSKSSDSSSPIPGGGNDPTQQDGEVKKAIKTDNVEKKLDEVRLNRLR 117

Query: 120 GDLDQLIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAI 179
             LDQLIE+DP+LRALRPHL I+++ EGLRIQIIDSQNRPMF+TGSA VEPYMRDILRAI
Sbjct: 118 ERLDQLIEADPRLRALRPHLLIEMIDEGLRIQIIDSQNRPMFKTGSAQVEPYMRDILRAI 177

Query: 180 APVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVV 239
           AP+LN  PN++S+SGHTDD  Y +GE+GYSNWELSADRANASRREL+ GGL  GKVLRVV
Sbjct: 178 APILNDFPNKLSISGHTDDVQYTTGERGYSNWELSADRANASRRELIFGGLSDGKVLRVV 237

Query: 240 GMAATMRLSD-RGPDDAVNRRISLLVLNKQAEQAILHENAESQNEPVSALEK-PEVAPQV 297
           GMAATM L    G +DA+NRRISLLVL++QA++ I  ENAES    +  +E    +    
Sbjct: 238 GMAATMSLKQATGGNDAINRRISLLVLSRQAQKDIEEENAESSAVNIDKVENLQNMELDK 297

Query: 298 SVPTMPSAE 306
             PT P+AE
Sbjct: 298 PKPTTPAAE 306