Pairwise Alignments

Query, 553 a.a., methyl-accepting chemotaxis protein II (NCBI) from Escherichia coli BW25113

Subject, 575 a.a., HAMP domain-containing protein from Dickeya dianthicola ME23

 Score =  379 bits (974), Expect = e-109
 Identities = 245/570 (42%), Positives = 345/570 (60%), Gaps = 28/570 (4%)

Query: 1   MINRIRVVTLLVMVLG-VFALLQLISGSLFFSSLHHSQKSFVVSNQLREQQGELTSTWDL 59
           ++  + +V L V++LG +  L  L  G+  +  +  +Q    V+ ++  + G   S+  L
Sbjct: 17  ILGNLGLVPLFVIILGGIMLLFALAIGTASYFLVRANQSLDYVTQEIDVRLGLSNSSNHL 76

Query: 60  MLQTRINLSRSAVRMMMDSSNQQSNAKVELLDSARKTLAQAATHYKKFKSMAPLPEM-VA 118
                + +   A   + D+    +N K      A + +A +   +  +++ A   E  +A
Sbjct: 77  RTARLLIIQAGAAVRVGDTDVFNNNLK-----QAEQRIASSKDAFNVYENRAVKTETDLA 131

Query: 119 TSRNIDEKYKNYYTALTELIDYLDYGNTGAYFAQPTQGMQNA--MGEAFAQYALSSEKLY 176
               +++ Y +Y      ++  L     G +    T   +    + EA+ +  L +    
Sbjct: 132 LEPELNKAYNDYVEK--GIMPMLKAAKDGYFEEILTHESEEVRVLDEAYNKPLLKAIAFR 189

Query: 177 RD---IVTDNADDYRFAQWQLAVIALVVVLIL-LVAWYGIRRMLLTPLAKIIAHIREIAG 232
            +    +  NA       + L  ++  + + + L+ +  +R  L+ P+ +++  I+ IA 
Sbjct: 190 TERAKALNSNAQYQAMMGYTLMAVSFAIAIAMTLLTFLFLRGTLIKPMNRLVQRIQRIAH 249

Query: 233 GNLANTLTIDGRSEMGDLAQSVSHMQRSLTDTVTHVREGSDAIYAGTREIAAGNTDLSSR 292
           G+L     + G++E+G L Q++  MQ SL  TV+ VR+ +D+IY GT EI AGN DLSSR
Sbjct: 250 GDLTQPDDVYGKNEIGILGQNIQQMQTSLVHTVSTVRDSTDSIYQGTTEITAGNNDLSSR 309

Query: 293 TEQQASALEETAASMEQLTATVKQNADNARQASQLAQSASDTAQHGGKVVDGVVKTMHEI 352
           TEQQA+A+EETAASMEQLTATVKQN+DNA  ASQLA +AS  A+ GG++V+ VV TM+ I
Sbjct: 310 TEQQAAAIEETAASMEQLTATVKQNSDNAHHASQLASNASGKAKQGGEIVENVVNTMNSI 369

Query: 353 ADSSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLASRSAQAA 412
           + SS+KI++I SVI+ IAFQTNILALNAAVEAARAGEQGRGFAVVAGEVR+LA RSAQAA
Sbjct: 370 SGSSRKISEITSVINSIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAQAA 429

Query: 413 KEIKALIEDSVSRVDTGSVLVESAGETMNNIVNAVTRVTDIMGEIASASDEQSRGIDQVA 472
           KEI+ LI +SV  V +GS LV+ AG+TM+ IV AV+ VT IM EIASASDEQSRGI QV 
Sbjct: 430 KEIEGLISESVFLVHSGSELVDKAGQTMHEIVQAVSSVTHIMNEIASASDEQSRGITQVG 489

Query: 473 LAVSEMDRVTQQNASLVQESAAAAAALEEQASRLTQAVSAFRL---------AASPLTNK 523
            A+SEMD VTQQNA+LVQ++ AAAA+LEEQA  LT+AVSAF+L         A +PL  K
Sbjct: 490 QAISEMDSVTQQNAALVQQATAAAASLEEQAMVLTRAVSAFKLTGHHQDKAYAPAPLAPK 549

Query: 524 PQTPSRPASEQPPAQPRLRIAEQDPNWETF 553
           P    R A+         R      NWETF
Sbjct: 550 P----RLATSTAALGSSSRAKPGQDNWETF 575