Pairwise Alignments

Query, 440 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

Subject, 460 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  143 bits (361), Expect = 1e-38
 Identities = 114/405 (28%), Positives = 179/405 (44%), Gaps = 18/405 (4%)

Query: 45  ATPIVKTIELEQNEIRSLLPEASEPIDQAAQEDEAIPQDELDDKIAGEAGVHEYVVSTGD 104
           AT + +  +            A +P   A    EA      D    G        +  GD
Sbjct: 25  ATVVARNADAPNGRAPHAYKPAVKPNTGAESAAEAKDNAGDDGPATGPVDRRTLSIGRGD 84

Query: 105 TLSSILNQYGIDMGDITQLAAADKEL---RNLKIGQQLS--WTLTADGELQRLTWEVSRR 159
           TL  +L    +   D     AA +E+   R L++GQ ++  +     G  + + +E +  
Sbjct: 85  TLMDLLATANVPTNDAHDAVAALREVYNPRRLQVGQHVTVLFEPRRGGARKFVGFEFAPD 144

Query: 160 ETRTYDRTAANGFKMTSEMQQGEWVNNLL--KGTVGGSFVASARNAGLTSAEVSAVIKAM 217
             R+           TS   +       +  +G +  S   +   AG+  + + A I+  
Sbjct: 145 PLRSVSIARKGDAGFTSSQTEKPVTRKPVAAQGVIRSSLFEAGAQAGVPISVMMAFIQNF 204

Query: 218 QWQMDF-RKLKKGDEFAVLMSREML-DGKRE-QSQLLGVRLRSEGKDY--YAIRAEDGK- 271
            + +DF R L+ GD F +L  + +  +G +  + +LL   L   G D   Y  +  DG+ 
Sbjct: 205 SYDVDFQRDLQPGDRFEILYEKLITAEGTQAGEGELLYASLTLSGDDMPIYRFKTRDGRV 264

Query: 272 -FYDRNGTGLAKGFLRFPTAKQFRISSNFNPRRTNPVTGRVAPHRGVDFAMPQGTPVLSV 330
            +Y+ +G  + +  LR P     RI+S F  R  +P+ G    H+GVDF  P GTP+ + 
Sbjct: 265 DYYNGDGESIRRALLRTPIDGA-RITSGFGMRH-HPILGFSKMHKGVDFGAPNGTPIYAA 322

Query: 331 GDGEVVVAKRSGAAGYYVAIRHGRSYTTRYMHLRKIL--VKPGQKVKRGDRIALSGNTGR 388
           G G + +A+RS + G YV IRH    +T Y H+ +    +  G +V +GD I   G TGR
Sbjct: 323 GRGTIEIAERSSSYGNYVRIRHNTEISTAYAHMSRFAKSISRGARVDQGDIIGYVGTTGR 382

Query: 389 STGPHLHYEVWINQQAVNPLTAKLPRTEGLTGSDRREFLAQAKEI 433
           STGPHLHYEV      VNP +  LP  E L G + + F    + I
Sbjct: 383 STGPHLHYEVLKAGHQVNPRSVDLPTGEKLDGRELQTFQQARRSI 427