Pairwise Alignments

Query, 682 a.a., carboxy-terminal protease for penicillin-binding protein 3 (NCBI) from Escherichia coli BW25113

Subject, 493 a.a., Carboxyl-terminal protease (EC 3.4.21.102) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  132 bits (331), Expect = 5e-35
 Identities = 124/466 (26%), Positives = 204/466 (43%), Gaps = 84/466 (18%)

Query: 206 NSEDVFSLAMTAFAREIDPHTNYLSPRNTEQFNTEMSLSLEGIGAVLQMDDDYTVINSMV 265
           + + + S A++     +DPH+ Y   ++ ++F    S    G+G  + M+D    + S +
Sbjct: 60  DEKKLISEAISGMVASLDPHSQYFDKKSFKEFREGTSGRFVGVGIEITMEDGLVKVVSPI 119

Query: 266 AGGPAAKSKAISVGDKIVGVGQTGKPMVDVIGWRLDDVVALIKGPKGSKVRLEILPAGKG 325
              PA ++  +  GD I  +  T      V G  ++D V L++G   +KV L I    + 
Sbjct: 120 EDSPAFRA-GLKTGDLITKIDDT-----QVKGLSINDAVKLMRGEPRTKVLLNIYRKDEN 173

Query: 326 TKTRTVTLTRERIRLEDRAVKMSVKTVGKEKVGVLDIPGFYVGLTDDVKVQLQKLEKQ-- 383
            ++  VT+TRE I+ +  +VK  V   G   V V     F     +D   +++ + K   
Sbjct: 174 -RSFPVTITREEIKTQ--SVKSRVVEPGYAWVRVSQ---FQERTIEDFARKMEDIYKADP 227

Query: 384 NVSSVIIDLRSNGGGALTEAVSLSGLFIPAGPIVQVRDNNGKVRED-------------- 429
           N+  +++DLR++ GG L  AV+LS  F+P    V V   NG++ +               
Sbjct: 228 NLKGLVLDLRNDPGGLLDAAVALSAAFLPEN--VTVVSTNGQLEDSKFTYKATPQHYLRR 285

Query: 430 ---------SDTDGQVFYKGPLVVLVDRFSASASEIFAAAMQDYGRALVVGEPTFGKGTV 480
                    +D       + PLVVLV+  SASASEI A A+QD+ RA ++G  TFGKG+V
Sbjct: 286 GGTDPIKRLTDNTQGALKRLPLVVLVNEGSASASEIVAGALQDHKRATILGSQTFGKGSV 345

Query: 481 QQYRSLNRIYDQMLRPEWPALGSVQYTIQKFYRVNGGSTQRKGVTPDIIMPTGNEETETG 540
                      Q +RP  P  G ++ T  ++Y  +G S Q KG+ PD+++    +ET  G
Sbjct: 346 -----------QTVRPLGPDTG-LKLTTARYYTPSGNSIQAKGIVPDVMV----DETPEG 389

Query: 541 EKFEDNALPWDSIDAATYVKSGDLTA---------------------------FEPELLK 573
             F   AL     D   ++ +G   A                            E E  K
Sbjct: 390 NVFA--ALRTREADLQKHLNNGTEAAKGDQGMTDAQRVAEQQRDEAREAARKRLEEEAKK 447

Query: 574 EHNARIAKDPEFQNIMKDIARFNAMKDKRNIVSLNYAVREKENNED 619
             N R+  +       + +   N +K +  +VS   +VR +E  E+
Sbjct: 448 NPNQRLVPEFGTDKDFQLMQALNQLKGQPVLVSKTLSVRTEEKKEN 493