Pairwise Alignments

Query, 496 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

Subject, 493 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score = 86.7 bits (213), Expect = 2e-21
 Identities = 54/182 (29%), Positives = 96/182 (52%), Gaps = 8/182 (4%)

Query: 321 LTALILLNMVRMHFRLYQNVSRENIS--DAMTGLYNRKILTPELEQRLQKLVQSGSSVMF 378
           +  L++L +V    R +Q  S E ++  D++TGLYNR+       Q L++  +  S ++ 
Sbjct: 305 MITLVVLALVHAMVRRHQ-ASTEALATLDSLTGLYNRRSFDLLAAQALREARRDSSPLVA 363

Query: 379 IAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQI 438
           + ID+D  K +ND  GH  GD  +   A  ++ S+R+SD   R GG+EF ++L ++  + 
Sbjct: 364 LLIDLDHFKALNDNHGHLAGDEVLRQFANVLQGSLRQSDILCRWGGEEFIVLLREAEGRQ 423

Query: 439 AAQLPERIEKRLQHIA-----PQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKN 493
           A ++ E+I +R + +          +  S G+ +++  DTLH     +D  LY  KQ   
Sbjct: 424 AIEVAEKIRRRTEQLTFSYDNQPLRLTTSIGLSSLQPGDTLHALLTRADRALYRAKQAGR 483

Query: 494 SR 495
           +R
Sbjct: 484 NR 485