Pairwise Alignments

Query, 496 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

Subject, 534 a.a., diguanylate cyclase from Pectobacterium carotovorum WPP14

 Score =  295 bits (754), Expect = 3e-84
 Identities = 172/501 (34%), Positives = 273/501 (54%), Gaps = 21/501 (4%)

Query: 9   RHFIAASVIVLTSSFLIFE--LVASDRAMSAYLRYIVQKADSSFLYDKYQNQSIAAHVMR 66
           + +I+A V+++  +  +F   L    R +  Y+ Y+ +   S+  +++  NQ+IA  + R
Sbjct: 33  KKYISAIVLIVACTTALFTALLFHEVRNLQNYMGYVAENGKSALFHEESINQNIATRLSR 92

Query: 67  ALAAEQSEVSPEQRR-----AICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTIV 121
           A     S  SP+         IC+  E+  +  G NL A     L GT QT +T C+   
Sbjct: 93  AFF---SRTSPDNHTDAEVAEICQHVETEGSISGFNLVAKTMNNLEGTFQTLNTSCEEWG 149

Query: 122 EAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNNW 181
                L    +       +  + +    A +   YY+DL+  Y+Y    VN   +  NNW
Sbjct: 150 RDIGALSVIHRTESDALPKYSFSNYTDYAFKNIRYYIDLSHNYIYINRRVNTRNYTFNNW 209

Query: 182 SFLQSGS----------IGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQ 231
             + +GS          I ID   ++ +  G  ++S IYQD  TK N++S+LTPV+++ +
Sbjct: 210 -LVNNGSRINIARSAHTITIDDNALDDLIRGENIVSHIYQDGYTKNNIISMLTPVFLSDK 268

Query: 232 LKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVH 291
           +KGI++ D+N N+L   F T DRPLLW+FL++ +TD  +G +II ++     F  +++  
Sbjct: 269 VKGILITDVNINDLVVSFKTVDRPLLWKFLSLYVTDNATGANIIFHKPSIKSFDLINHDD 328

Query: 292 DLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTG 351
            +     + + +D +Y I ++   VLF+ L   IL        +  + +SR+N++DAMTG
Sbjct: 329 TITQYYTLHVKLDAIYVIIANIWLVLFYALITWILCRYASKQLKRQELLSRDNVTDAMTG 388

Query: 352 LYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQ 411
           LYNRKI+TPELEQ+ + LV     V  IAID D LK+IND+LGH  GD AI  L  A+  
Sbjct: 389 LYNRKIITPELEQKTRTLVGRNIPVTVIAIDSDGLKRINDSLGHHMGDKAIQYLGSALGN 448

Query: 412 SIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKEN 471
           +IRKSDY IRLGGDEFC++L+D +   +  +  R ++ L  I  +K + FS G + + + 
Sbjct: 449 AIRKSDYGIRLGGDEFCLVLIDYSLTKSRDVIARAQEYLLTIDKEKLVAFSWGAHQLHQG 508

Query: 472 DTLHDAYKASDERLYVNKQNK 492
           DTL  A   +DE LY +K++K
Sbjct: 509 DTLEVAMLKADELLYQHKRSK 529