Pairwise Alignments

Query, 496 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

Subject, 343 a.a., diguanylate cyclase (GGDEF) domain from Kangiella aquimarina DSM 16071

 Score = 96.3 bits (238), Expect = 2e-24
 Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 6/175 (3%)

Query: 321 LTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIA 380
           ++ L+   M    +     + R    D +TG+ NR +    L Q +    + GS V  IA
Sbjct: 161 MSELVASTMFNAQYYAQDELFRRATRDELTGISNRALFMDHLHQNIAHAKRDGSKVALIA 220

Query: 381 IDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIIL-----VDST 435
           IDMD LK +NDT GH  GD A+  LA    ++IR SD   R GGDEF I L     +DS 
Sbjct: 221 IDMDNLKVLNDTYGHHIGDKALKTLANRFSETIRSSDTVSRFGGDEFAITLSPVNGMDSA 280

Query: 436 PQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKEN-DTLHDAYKASDERLYVNK 489
             +   L + ++  ++    + ++G S GI    ++ +T+ +  + +D+R++ NK
Sbjct: 281 KAVVQNLIQSLDLPMKEDGQEFQLGASFGIAIFPDDVNTVDELLELADKRMFANK 335