Pairwise Alignments

Query, 500 a.a., putative tripeptide transporter permease (NCBI) from Escherichia coli BW25113

Subject, 514 a.a., amino acid/peptide transporter (Peptide:H+ symporter), bacterial from Enterobacter asburiae PDN3

 Score =  229 bits (584), Expect = 2e-64
 Identities = 146/525 (27%), Positives = 265/525 (50%), Gaps = 41/525 (7%)

Query: 2   STANQKPTESVSLNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQ-----LGMSE 56
           ST NQK + +     F  P     +F  E+WERF +YG++ ++ +++        +G++ 
Sbjct: 3   STVNQKESRTF----FGHPYPLGSLFFTEMWERFSFYGIRPLLILFMAATVYDGGMGLAR 58

Query: 57  ADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSG-HDAGIV 115
            ++  +   F+  +Y     GGWL D  LG +R +  G+I++A+G+  +A S      + 
Sbjct: 59  ENASAIVGIFAGTMYLAALPGGWLADNWLGQQRAVWYGSILIALGHLSIALSAVMGNNLF 118

Query: 116 YMGMAAIAVGNGLFKANPSSLLSTCYEKNDPRLDGAFTMYYMSVNIGSFFSMIATPWLAA 175
           ++G+  I +G+GLFK   S ++ T Y+K D R DG F+++YM +N+GSF + + + WL  
Sbjct: 119 FIGLMFIVLGSGLFKTCISVMVGTLYKKGDARRDGGFSLFYMGINMGSFIAPLISGWLIK 178

Query: 176 KYGWSVAFALSVVGLLITIVNF-AFCQRWVKQYGSKPDFE-----PINYRN--------L 221
            +GW   F +  +G+L+ ++ F  F    +K+Y  +   +     P+  RN        L
Sbjct: 179 THGWHWGFGIGGIGMLVALIIFRVFAVPAMKRYDGEVGLDSTWNSPVVKRNGVGVWLLAL 238

Query: 222 LLTIIGVVALIAIATWLLHNQEVARMALGVVAFGIVVIFGKEAFAMKGAARR---KMIVA 278
              +  +V LIA    +++   VA + + V+A  + + F    F   G  R+   +++V 
Sbjct: 239 AAGVATIVTLIAQGVIVINPVAVASVLVYVIAASVALYF-IYLFVFAGLNRKERARLLVC 297

Query: 279 FILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGLAVEPEQYQALNPFWIIIGSPILAA 338
           FIL++ A  F+  + Q PTS N FA       I    +    +Q++N  +II+ +P+ + 
Sbjct: 298 FILLISAAFFWSAFEQKPTSFNLFANDYTNRMIGDFEIPAVWFQSINALFIILLAPVFSW 357

Query: 339 IYNKMGDTLPMP---TKFAIGMVMCSGAFLILPLGAKFASDAGIVSVS--WLVASYGLQS 393
            + K+      P   TKF IG++  +  F ++ L A+    +G   VS  WLV S  + +
Sbjct: 358 AWPKLASKNIRPSSITKFVIGILCAAAGFGLMMLAAQNVLSSGGAGVSPFWLVGSILMLT 417

Query: 394 IGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGANLIGGYVAGMMAVPDNVTDPLMS 453
           +GEL +S +GLA +  L P+R+ G +MG WF  +A  NL  G + G +            
Sbjct: 418 LGELCLSPIGLATMTLLAPERMRGQMMGLWFCASALGNLAAGLIGGHVKAD--------Q 469

Query: 454 LEVYGRVFLQIGVATAVIAVLMLLTAPKLHRMTQDDAADKAAKAA 498
           L++   +F +  +A  + A ++++    + RM ++     AA A+
Sbjct: 470 LDMLPDLFARCSIALLICAAVLIVLIVPVRRMLENAQTKPAANAS 514