Pairwise Alignments

Query, 406 a.a., DNA-binding transcriptional repressor (NCBI) from Escherichia coli BW25113

Subject, 406 a.a., N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  303 bits (775), Expect = 8e-87
 Identities = 163/400 (40%), Positives = 250/400 (62%), Gaps = 2/400 (0%)

Query: 6   QPGHIDQIKQTNAGAVYRLIDQLGPVSRIDLSRLAQLAPASITKIVREMLEAHLVQELEI 65
           Q G++D +KQ N+ AVYRLIDQ GP+SRI ++  +QLAPAS+TKI R+++E  L++E++ 
Sbjct: 8   QIGNVDLVKQLNSAAVYRLIDQHGPISRIQIAEQSQLAPASVTKITRQLIERGLIKEVD- 66

Query: 66  KEAGNRGRPAVGLVVETEAWHYLSLRISRGEIFLALRDLSSKLVVEESQELALKDDLPLL 125
           ++A   GR A+ +V ET  +H + +R+ R +  L L DLSSK+V EE   L  +    L 
Sbjct: 67  QQASTGGRRAISIVTETRNFHAIGVRLGRHDTTLTLYDLSSKVVAEEHYPLPERTQETLE 126

Query: 126 DRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTENGIVHRMPFYEDVKEMPLGEALEQH 185
             +++ I  F    Q+K+  L +I++ LPG++D E+G++  MP  + V+   L EALE+ 
Sbjct: 127 HALLNTIAVFIDSCQRKIRELIAISVILPGLVDPESGVIRYMPHIQ-VENWGLVEALEKR 185

Query: 186 TGVPVYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSSSLVEI 245
             V  ++ HDI +  +AE  FGAS+   D I V +    GAG+I++G +    + ++ EI
Sbjct: 186 FHVTCFVGHDIRSLALAEHYFGASQDCEDSILVRVHRGTGAGIISNGRIFIGRNGNVGEI 245

Query: 246 GHTQVDPYGKRCYCGNHGCLETIASVDSILELAQLRLNQSMSSMLHGQPLTVDSLCQAAL 305
           GH QV+P G+RC+CGN GCLETIA+  +I +     L Q   S +     T+ ++C+AA 
Sbjct: 246 GHIQVEPLGERCHCGNFGCLETIAANAAIEQRVLNLLKQGYQSRVPLDDCTIKTICKAAN 305

Query: 306 RGDLLAKDIITGVGAHVGRILAIMVNLFNPQKILIGSPLSKAADILFPVISDSIRQQALP 365
           RGD LA ++I  VG H+G+ +AI +NLFNPQKI+I   + +A  +L P I   I  QAL 
Sbjct: 306 RGDSLASEVIEHVGRHLGKTIAIAINLFNPQKIVIAGEIIEADKVLLPAIESCINTQALK 365

Query: 366 AYSQHISVESTQFSNQGTMAGAALVKDAMYNGSLLIRLLQ 405
           A+ +++ V  +   ++  +   ALVK AM NG+LL  LL+
Sbjct: 366 AFRKNLPVVRSTLDHRSAIGAFALVKRAMLNGTLLQCLLE 405