Pairwise Alignments

Query, 406 a.a., DNA-binding transcriptional repressor (NCBI) from Escherichia coli BW25113

Subject, 409 a.a., ROK family protein from Dickeya dianthicola 67-19

 Score =  309 bits (792), Expect = 8e-89
 Identities = 164/402 (40%), Positives = 249/402 (61%), Gaps = 2/402 (0%)

Query: 4   ENQPGHIDQIKQTNAGAVYRLIDQLGPVSRIDLSRLAQLAPASITKIVREMLEAHLVQEL 63
           + Q G+ID +KQ N+ AVYRLIDQ GP+SRI +S  +QLAPAS+TKI R++LE  L++E+
Sbjct: 6   QTQIGNIDLVKQLNSAAVYRLIDQQGPISRIQISEQSQLAPASVTKITRQLLERGLIKEV 65

Query: 64  EIKEAGNRGRPAVGLVVETEAWHYLSLRISRGEIFLALRDLSSKLVVEESQELALKDDLP 123
           + ++A   GR A+ ++ ET  +H +++R+ R +  LAL DL  K + EE   L       
Sbjct: 66  D-QQASTGGRRAISIISETRPFHTVAVRLGRHDATLALYDLQGKRLEEEHCNLPENTQDT 124

Query: 124 LLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTENGIVHRMPFYEDVKEMPLGEALE 183
           L   + + IDQF  RHQ+++  L +I++ LPG++D   G+V  MP +  V   PL + LE
Sbjct: 125 LESALFTVIDQFIARHQRRIRELIAISVVLPGLVDPGAGVVRYMP-HISVDNWPLVDNLE 183

Query: 184 QHTGVPVYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSSSLV 243
           +H  V  ++ HDI +  +AE  FGA+R  +D + V +   VGAG++ +G +    + ++ 
Sbjct: 184 RHFKVHSFVGHDIRSLALAEHYFGATRDCQDSLLVRVHRGVGAGILVNGKIFLGSNGNVG 243

Query: 244 EIGHTQVDPYGKRCYCGNHGCLETIASVDSILELAQLRLNQSMSSMLHGQPLTVDSLCQA 303
           EIGH Q+DP G RC+CGN GCLET+AS  ++ + A+  L Q   S L      + ++C+A
Sbjct: 244 EIGHIQIDPLGDRCHCGNFGCLETVASNGALEQRARHLLQQEFPSKLTLDDCQIAAICKA 303

Query: 304 ALRGDLLAKDIITGVGAHVGRILAIMVNLFNPQKILIGSPLSKAADILFPVISDSIRQQA 363
           A RGDLLA+++I   G H+G+ ++I VNLFNPQ+++I   ++ A  IL P I   I  Q 
Sbjct: 304 ANRGDLLARELIEAAGQHLGKAISIAVNLFNPQRVVIAGEITGADKILLPAIQRCINAQV 363

Query: 364 LPAYSQHISVESTQFSNQGTMAGAALVKDAMYNGSLLIRLLQ 405
           L  + Q++ V   +  +   +   ALVK AM NG LL RLL+
Sbjct: 364 LKDFRQNLPVVVAELQHLSAIGAFALVKRAMLNGVLLQRLLE 405