Pairwise Alignments

Query, 460 a.a., predicted diguanylate cyclase (RefSeq) from Escherichia coli BW25113

Subject, 496 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  110 bits (276), Expect = 8e-29
 Identities = 69/158 (43%), Positives = 91/158 (57%), Gaps = 3/158 (1%)

Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357
           D LT L NRR L  + ++E A A R+  PL++L++DVD FK  N   GH  GD  LR+V+
Sbjct: 337 DSLTGLANRRRLDHVLRQEWARAQRSRKPLAILMVDVDHFKAFNQRHGHAGGDHALREVA 396

Query: 358 QAFYDNV-RSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIAL 416
           +A    + R +D   RYGG+EF +VL E         AERIR+ VE     A +    A+
Sbjct: 397 KAIEACIRRPADLAARYGGEEFQVVLPETDLAGAQLLAERIRANVEALAPFADDAH--AV 454

Query: 417 SLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454
           ++SIG  +     D  RL+  ADEALY AK  GRNRVE
Sbjct: 455 TVSIGIGLSGTQQDLGRLLGAADEALYRAKANGRNRVE 492