Pairwise Alignments

Query, 308 a.a., D-ala-D-ala transporter subunit (NCBI) from Escherichia coli BW25113

Subject, 334 a.a., dipeptide/heme ABC transporter ATPase from Escherichia coli BL21

 Score =  238 bits (606), Expect = 2e-67
 Identities = 127/293 (43%), Positives = 176/293 (60%), Gaps = 14/293 (4%)

Query: 1   MSDTLLTLRDVHINFPARKNWLGKTTEHVHAINGIDLQIRRGETLGIVGESGCGKSTLAQ 60
           +   LL   D+  ++P +K         V A++G+   + RG+TL +VGESGCGKSTL +
Sbjct: 8   LQQPLLQAIDLKKHYPVKKGMFAPE-RLVKALDGVSFNLERGKTLAVVGESGCGKSTLGR 66

Query: 61  LLMGMLQPSHGQYIRSGSQRI-------------MQMVFQDPLSSLNPRLPVWRIITEPL 107
           LL  +  P+ G+    G   +             +Q+VFQ+P  SLNPR  V +I+ EPL
Sbjct: 67  LLTMIEMPTGGELYYQGQDLLKHDPQAQKLRRQKIQIVFQNPYGSLNPRKKVGQILEEPL 126

Query: 108 WIAKRSSEQQRRALAEELAVQVGIRPEYLDRLPHAFSGGQRQRIAIARALSSQPDVIVLD 167
            I    S++QRR  A  +  +VG++ E+ DR PH FSGGQRQRIAIAR L   PDV++ D
Sbjct: 127 LINTSLSKEQRREKALSMMAKVGLKTEHYDRYPHMFSGGQRQRIAIARGLMLDPDVVIAD 186

Query: 168 EPTSALDISVQAQILNLLVTLQENHGLTYVLISHNVSVIRHMSDRVAVMYLGQIVELGDA 227
           EP SALD+SV+AQ+LNL++ LQ+  GL+YV ISH++SV+ H++D V VMYLG+ VE G  
Sbjct: 187 EPVSALDVSVRAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTK 246

Query: 228 QQVLTAPAHPYTRLLLDSLPAIDKPLEEEWALRKTDLPGNRTLPQGCFFYERC 280
            Q+   P HPYT+ LL + P ++     E      +LP     P GC F  RC
Sbjct: 247 DQIFNNPRHPYTQALLSATPRLNPDDRRERIKLSGELPSPLNPPPGCAFNARC 299