Pairwise Alignments

Query, 307 a.a., putative transcriptional regulator LYSR-type (VIMSS) from Escherichia coli BW25113

Subject, 310 a.a., Transcriptional regulator PcaQ from Pseudomonas putida KT2440

 Score =  196 bits (497), Expect = 8e-55
 Identities = 114/274 (41%), Positives = 165/274 (60%), Gaps = 2/274 (0%)

Query: 10  RIRLRHLHTFVAVAQQGTLGRAAETLNLSQPALSKTLNELEQLTGARLFERGRQGAQLTL 69
           RI+ RHL  F+ +A+QG+L RAA+ L++SQPA+SKTL ELE L  ARLFER RQG +LT 
Sbjct: 6   RIKYRHLLCFLEIARQGSLARAADILSISQPAISKTLKELEDLLEARLFERSRQGVELTP 65

Query: 70  PGEQFLTHAVRVLDAINTAGRSLHRKEGLNNDVVRVGALPTAALGILPSVIGQFHQQQKE 129
            G +F+ +A   + A+     SL R E      VR+G L T    ++P V+ + HQ+ + 
Sbjct: 66  AGTRFMRYAGPSVQALRDGVSSL-RGEARAPSQVRIGVLSTVEGLLMPEVLCRLHQRHEA 124

Query: 130 TTLQVATMSNPMILAGLKTGEIDIGIGRMSDPELMTGLNYELLFLESLKLVVRPNHPLLQ 189
             + V T  +  +L  L  GE+++ +GRM+D   + GL++E L+ ES+ LVVRP HPLL 
Sbjct: 125 LVISVVTGVSAQLLGQLHLGELELVVGRMTDSPQIQGLSFEHLYSESMSLVVRPGHPLLA 184

Query: 190 EN-VTLSRVLEWPVVVSPEGTAPRQHSDALVQSQGCKIPSGCIETLSASLSRQLTVEYDY 248
              V   +V  +P+V+ P GT  RQH+D+L    G ++P+  +ETLS +LSR+  +  D 
Sbjct: 185 STPVERGQVGRYPLVLPPAGTTIRQHADSLFVQCGIQMPAQRLETLSLALSRRYLLGSDG 244

Query: 249 VWFVPSGAVKDDLRHATLVALPVPGHGAGEPIGI 282
           +W  P  AV  DLR   LV L +     G  +GI
Sbjct: 245 LWVAPRDAVLLDLRRGELVELDLGVREPGGSVGI 278