Pairwise Alignments

Query, 457 a.a., ATP-dependent RNA helicase, specific for 23S rRNA (NCBI) from Escherichia coli BW25113

Subject, 457 a.a., Superfamily II DNA and RNA helicases from Enterobacter asburiae PDN3

 Score =  822 bits (2124), Expect = 0.0
 Identities = 416/457 (91%), Positives = 432/457 (94%)

Query: 1   MTAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLG 60
           MTAFSTLNVLP AQL NLNELGYLTMTPVQAAALPAIL G+DVRVQAKTGSGKTAAFGLG
Sbjct: 1   MTAFSTLNVLPAAQLDNLNELGYLTMTPVQAAALPAILEGRDVRVQAKTGSGKTAAFGLG 60

Query: 61  LLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQ 120
           LLQ IDA+LFQTQ+LVLCPTRELADQVAGELRRLAR LPNTKILTLCGGQPFG QRDSLQ
Sbjct: 61  LLQHIDAALFQTQSLVLCPTRELADQVAGELRRLARCLPNTKILTLCGGQPFGAQRDSLQ 120

Query: 121 HAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQT 180
           HAPHIIVATPGRLLDHLQKGTVSLDAL TLVMDEADRMLDMGFSDAID+VI FAPA RQT
Sbjct: 121 HAPHIIVATPGRLLDHLQKGTVSLDALQTLVMDEADRMLDMGFSDAIDEVIHFAPADRQT 180

Query: 181 LLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQ 240
           LLFSATWPEAIAAISGRVQ++PL IEIDS DALP IEQQF+ETS +GKI LLQ+LLS HQ
Sbjct: 181 LLFSATWPEAIAAISGRVQKNPLTIEIDSVDALPAIEQQFFETSQQGKISLLQKLLSQHQ 240

Query: 241 PSSCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDV 300
           P+SCVVFCNTKKDCQ+VCDALN  GQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDV
Sbjct: 241 PASCVVFCNTKKDCQSVCDALNAAGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDV 300

Query: 301 AARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANIISDML 360
           AARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAIS CAPEEAQRANI+S+ML
Sbjct: 301 AARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISLCAPEEAQRANILSEML 360

Query: 361 QIKLNWQTPPANSSIATLEAEMATLCIDGGKKAKMRPGDVLGALTGDIGLDGADIGKIAV 420
           QIKLNW   PA+ S+  LEAEMATLCIDGGKKAKMRPGDVLGALTGD+GLDGADIGKIAV
Sbjct: 361 QIKLNWMNAPASVSLVPLEAEMATLCIDGGKKAKMRPGDVLGALTGDVGLDGADIGKIAV 420

Query: 421 HPAHVYVAVRQAVAHKAWKQLQGGKIKGKTCRVRLLK 457
           HPAHVYVAVRQAVAHKAWKQLQ GKIKGKTCRVRLLK
Sbjct: 421 HPAHVYVAVRQAVAHKAWKQLQNGKIKGKTCRVRLLK 457