Pairwise Alignments

Query, 280 a.a., predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

Subject, 283 a.a., carbohydrate ABC transporter permease from Variovorax sp. OAS795

 Score =  156 bits (395), Expect = 4e-43
 Identities = 92/264 (34%), Positives = 151/264 (57%), Gaps = 9/264 (3%)

Query: 21  LIITLFPFFVMLMTSFKGAKEAISLHPTLLPQQWTLEHYVDIFNPMIFPFVDYFR----N 76
           L+ TL P + M++ +      A S H  L P+  TL+++  +F    F ++D+F     N
Sbjct: 23  LLWTLVPVYHMVLFAISSKDSATSGH--LWPKNPTLDNFRIVFQQKHF-YLDHFWLQLWN 79

Query: 77  SLVVSVVSSVVAVFLGILGAYALSRLRFKGRMTI-NASFYTVYMFSGILLVVPLFKIITA 135
           SL+++V    + +F+    A+A+SRLR +G  T+ N + +T Y      L VP++K +  
Sbjct: 80  SLLIAVSVGAITLFVATTAAFAISRLRVRGGRTVMNLALFT-YFIPAAFLAVPMYKTMGN 138

Query: 136 LGIYDTEMALIITMVTQTLPTAVFMLKSYFDTIPDEIEEAAMMDGLNRLQIIFRITVPLA 195
            G+ +++ ALI+ MVT   P  +++LK   D +P E++EAA MDG + LQ+   + +PL 
Sbjct: 139 YGLLNSQWALILAMVTIASPYCIWVLKQASDKLPYELDEAARMDGASPLQLFRLVYLPLM 198

Query: 196 MSGLISVFVYCFMVAWNDYLFASIFLSSASNFTLPVGLNALFSTPDYIWGRMMAASLVTA 255
           +  L++V  Y  ++AWN+YL+A + LS+  + TL V L    S  D  W  +MA  L+ A
Sbjct: 199 VPSLVAVGTYSLLLAWNEYLYAFLLLSNDRSVTLAVALGNFLSADDSPWELLMATGLIYA 258

Query: 256 LPVVIMYALSERFIKSGLTAGGVK 279
           LP   +Y   +R++  GLTAG VK
Sbjct: 259 LPPAAIYYAFKRYMVGGLTAGAVK 282