Pairwise Alignments

Query, 280 a.a., predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

Subject, 276 a.a., carbohydrate ABC transporter permease from Rhizobium sp. OAE497

 Score =  164 bits (415), Expect = 2e-45
 Identities = 89/276 (32%), Positives = 145/276 (52%), Gaps = 2/276 (0%)

Query: 5   KRTLSRIGFYCGLALFLIITLFPFFVMLMTSFKGAKEAISLHPTLLPQQWTLEHYVDIFN 64
           +  +  I     +  +++  LFP F +L  S        S    + P + T EHY  +  
Sbjct: 3   RSVIPTIAHRLAILCYILFALFPLFWLLKVSVTPNDLLYSEGVRMWPSRTTWEHYSFVLQ 62

Query: 65  PMIFPFVDYFRNSLVVSVVSSVVAVFLGILGAYALSRLRFKGRMTINASFYTVYMFSGIL 124
              FP   +F+NSL+VS  +++       L  YALSR  F+ +  I A      MF  ++
Sbjct: 63  HSAFP--TFFKNSLIVSASTAITVTICASLSGYALSRFNFRAKYWIVALMLLTQMFPLVM 120

Query: 125 LVVPLFKIITALGIYDTEMALIITMVTQTLPTAVFMLKSYFDTIPDEIEEAAMMDGLNRL 184
           LV P+FKI+T L + ++   L+I      +P A F+++S+FD IP ++EEAAM+DG  + 
Sbjct: 121 LVAPIFKILTPLHLTNSLTGLVIVYTAFNVPFATFLMQSFFDGIPKDLEEAAMIDGATQF 180

Query: 185 QIIFRITVPLAMSGLISVFVYCFMVAWNDYLFASIFLSSASNFTLPVGLNALFSTPDYIW 244
               +I +PL + G+ +   + F  AW++ LFA + ++     T PVGL    S     +
Sbjct: 181 TAFRQIILPLTLPGIAATLGFVFTAAWSELLFALMLINGNDAATFPVGLLTFVSKFSVDF 240

Query: 245 GRMMAASLVTALPVVIMYALSERFIKSGLTAGGVKG 280
           G+MMAA ++  +P  + + L +R++  GLTAG VKG
Sbjct: 241 GQMMAAGVMALIPAGLFFLLIQRYLVQGLTAGAVKG 276