Pairwise Alignments

Query, 293 a.a., predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

Subject, 315 a.a., sugar ABC transporter permease from Dickeya dadantii 3937

 Score =  121 bits (304), Expect = 2e-32
 Identities = 87/291 (29%), Positives = 147/291 (50%), Gaps = 16/291 (5%)

Query: 4   LFSGRSDMPFALLLLAPSLLLLGGLVAWPMVSNIEISFLR-----LPLNPNIESTFVGVS 58
           +F+ R    +  LL+ PS  LL     +P++    +S  +     LP   + +  FVG+ 
Sbjct: 20  VFTRRLRKYWPYLLILPSFGLLLLFTFYPLLQGFWMSVFQRGVVVLPQVASTQPKFVGID 79

Query: 59  NYVRILSDPGFWHSLWMTVWYTALVVAGSTVLGLAVAMFFNREFRLRKTARSLVILSYVT 118
           N++++ +DP F H L  TV +    V  + V+ L +A+    + R    AR++V    + 
Sbjct: 80  NFIQVFTDPEFQHVLLRTVVFVVFAVPLNLVIALCMALLLAPQMRGFGLARTIVFFPSMI 139

Query: 119 PSISLVFAWKYMFNNGYGIVNYLGVDLLHLYEQAPL-WFDNPGSSFVLVVLFAIWRYFPY 177
             +++   WK++F    G++NY    +L L + +P+ W      + + VV+  +W    +
Sbjct: 140 SLLTIGIMWKWLFGYNSGLINY----VLSLVDISPVPWLQQETMAQIAVVIVWVWASAGF 195

Query: 178 AFISFLAILQTIDKSLYEAAEMDGANAWQRFRIVTLPAIMPVLATVVTLRTIWMFYMFAD 237
             +  LA L  I + LYEA+ MDG + W+ F  +TLP + P +  VV L +I  F ++  
Sbjct: 196 NMMILLAGLTAIPEDLYEASRMDGTSRWRTFWRITLPLLQPSVVVVVVLSSIEAFKVYEL 255

Query: 238 VYLLT-TKVDILGVYLYKTAF--AFND---LGKAAAISVVLFIIIFAVILL 282
           V  LT        VYL +T +  AF      G AAA SVVLF+I+FA+ ++
Sbjct: 256 VISLTGGGPGRATVYLIQTIYENAFMQPATAGVAAAQSVVLFVILFALSVI 306