Pairwise Alignments

Query, 293 a.a., predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

Subject, 308 a.a., ABC transporter membrane spanning protein from Agrobacterium fabrum C58

 Score =  173 bits (438), Expect = 5e-48
 Identities = 91/274 (33%), Positives = 152/274 (55%), Gaps = 9/274 (3%)

Query: 16  LLLAPSLLLLGGLVAWPMVSNIEISF--LRLPLNPNIESTFVGVSNYVRILSDPGFWHSL 73
           +L+AP++L++  ++ WP+V  I++SF  +++P        F  +SNY  + S P FW S 
Sbjct: 27  ILIAPAVLMVAAIIVWPLVLAIDLSFQQVKIPRLGGASRPF-SLSNYTWLFSSPEFWLSC 85

Query: 74  WMTVWYTALVVAGSTVLGLAVAMFFNREFRLRKTARSLVILSYVTPSISLVFAWKYMFNN 133
           W+T+    +V AGS  +GL+ A+  N  F+ R  AR  + L +  P I  V  + +MF+ 
Sbjct: 86  WVTLKLVVVVTAGSVAVGLSTALLANNRFKGRSVARLGMALPWAVPEIIAVVIFAWMFDT 145

Query: 134 GYGIVNYLGVDLLHLYEQAPLWFDNPGSSFVLVVLFAIWRYFPYAFISFLAILQTIDKSL 193
            +G+  +L + L    +  P W  +  ++F  V +  +W+ FP+  I  LA LQ+I    
Sbjct: 146 SFGLFGWLAIKLGFTDQMIP-WVSSSTAAFWAVAITMVWKGFPFVSIMCLAGLQSIPADY 204

Query: 194 YEAAEMDGANAWQRFRIVTLPAIMPVLATVVTLRTIWMFYMFADVYLLT-----TKVDIL 248
           Y AA++DGA+ WQRFR +T+P +MPVL   + L  +W+F  F+ + +LT          L
Sbjct: 205 YAAAKVDGASVWQRFRWITMPLLMPVLGVTLVLTLLWVFRDFSIIKVLTGGGPLRSTQTL 264

Query: 249 GVYLYKTAFAFNDLGKAAAISVVLFIIIFAVILL 282
            +  Y  AF +++ G+AAA+ V+  +I     LL
Sbjct: 265 SIMTYDQAFQYHNFGRAAAVGVLTLVICIVASLL 298