Pairwise Alignments

Query, 293 a.a., predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

Subject, 324 a.a., trehalose/maltose ABC transporter permease from Agrobacterium fabrum C58

 Score =  150 bits (379), Expect = 4e-41
 Identities = 98/296 (33%), Positives = 153/296 (51%), Gaps = 19/296 (6%)

Query: 14  ALLLLAPSLLLLGGLVAWPMVSNIEISFLRLPLNPNIESTFVGVSNYVR----------- 62
           A L LAP+ L+L  +  WP+V  +  SF    L     + FVG+ NY+            
Sbjct: 27  AWLFLAPTFLVLALVAGWPLVRTVWFSFTDASLTNLDGAQFVGLKNYLTWITLSSGRTIY 86

Query: 63  --ILSDPGFWHSLWMTVWYTALVVAGSTVLGLAVAMFFNREFRLRKTARSLVILSYVTPS 120
             +L+DP +W ++  T+ +T L V+  TVLGL VA+  N EF+ R   R+ +++ +  P+
Sbjct: 87  RGLLADPAWWGAVLNTLKFTILSVSFETVLGLIVALVLNAEFKGRGFVRAAILVPWAIPT 146

Query: 121 ISLVFAWKYMFNNGYGIVNYLGVDLLHLYEQAPLWFDNPGSSFVLVVLFAIWRYFPYAFI 180
           I     W +M N+ +GI+N L ++L  L      W  NP ++ V V++  IW+  P+  +
Sbjct: 147 IVSAQMWAWMLNDQFGILNDLFLNL-GLISNKIAWTANPDTAMVAVLIVDIWKTTPFMAL 205

Query: 181 SFLAILQTIDKSLYEAAEMDGANAWQRFRIVTLPAIMPVLATVVTLRTIWMFYMFADVYL 240
             LA LQ + K +YEAA++DG +  + F  VTLP I P L   V  R +    +F  +Y+
Sbjct: 206 LILAGLQMVPKDMYEAAKVDGIHPVKVFFRVTLPMIRPALMVAVIFRMLDAMRVFDLIYI 265

Query: 241 LT---TKVDILGVYLYKTAFAFNDLGKAAAISVVLFIII--FAVILLTRKRVNLNG 291
           LT    +   + V   +  F F+     AA S +LF+II    VI +   RVN +G
Sbjct: 266 LTPNNAQTRTMSVLARENLFDFDKFAYGAAASTMLFLIIASITVIYMWLGRVNTDG 321