Pairwise Alignments

Query, 293 a.a., predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

Subject, 308 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score =  161 bits (408), Expect = 1e-44
 Identities = 92/277 (33%), Positives = 149/277 (53%), Gaps = 12/277 (4%)

Query: 10  DMPFALLLLAPSLLLLGGLVAWPMVSNIEISFLRLPLNPNIESTFVGVSNYVRILSDPGF 69
           D   A+LLLAP+ +LL  ++ +P+   +  SF  L L   + + F+G  NY  +  DP F
Sbjct: 25  DRLLAVLLLAPAAILLSLIIVYPVARLVYTSFFSLSLTSGLPAEFIGFENYTAMFDDPIF 84

Query: 70  WHSLWMTVWYTALVVAGSTVLGLAVAMFFNREFRLRKTARSLVILSYVTP--SISLVFAW 127
           W + W TV  T + V G+  +GL +A+  N  F ++   R  +++ +  P     L+FAW
Sbjct: 85  WETTWNTVLITLITVPGALFMGLGLALLANLPFSMQWPMRLSLLIPWALPLSFAGLIFAW 144

Query: 128 KYMFNNGYGIVNYLGVDLLHLYEQAPLWFDNPGSSFVLVVLFAIWRYFPYAFISFLAILQ 187
              F+  YG+VN +   L  L  +  +WF++P  +F  + L  IW+   +  +  LA LQ
Sbjct: 145 --FFHYEYGVVNDV---LNRLGFEGIIWFNSPNWAFAAICLTIIWKTSSFMALMILAGLQ 199

Query: 188 TIDKSLYEAAEMDGANAWQRFRIVTLPAIMPVLATVVTLRTIWMFYMFADVYLLT----- 242
           TI +SLYEAA++DGA   +RF  +TLP + P +   +  RTI     F   Y++T     
Sbjct: 200 TIPRSLYEAADVDGAGKIRRFFEITLPLLKPSIVVALIFRTITALQTFDIPYMMTGGGPG 259

Query: 243 TKVDILGVYLYKTAFAFNDLGKAAAISVVLFIIIFAV 279
           T    L +Y+++   +F DLG  +A++VV+F +   V
Sbjct: 260 TSTTTLAMYIHQNTVSFLDLGYGSALAVVMFALSMCV 296