Pairwise Alignments

Query, 293 a.a., predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

Subject, 294 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score =  134 bits (338), Expect = 2e-36
 Identities = 89/281 (31%), Positives = 148/281 (52%), Gaps = 11/281 (3%)

Query: 16  LLLAPSLLLLGGLVAWPMVSNIEISFLRLPLNPNIESTFVGVSNYVRILSDPGFWHSLWM 75
           L  AP L+L+  ++  P+V  +  +F  + L       FVG+ +   +  D  F+ +L  
Sbjct: 12  LYSAPVLVLIVAVMLVPLVLGLSYAFRDVQLLNPFPGGFVGLKHLEALSQDAAFYRALKN 71

Query: 76  TVWYTALVVAGSTVLGLAVAMFFNREFRLRKTARSLVILSYVTPSISLVFAWKYMFNNGY 135
           T+W+T   V      GL +A+  ++ F  R  A++LV L +  P+      W ++FN   
Sbjct: 72  TLWWTGASVFLQFFFGLILALLLDKPFAGRGLAQALVFLPWAVPTFLAGLNWAWLFNPVI 131

Query: 136 GIVNYLGVDLLHLYEQAPLWFDNPGSSFVLVVLFAIWRYFPYAFISFLAILQTIDKSLYE 195
           G + +  V L  L     +  D P  +    ++  +W   P+  I+ LA LQ I + LYE
Sbjct: 132 GPLPHWMVSLGLLSAPNNILAD-PQLAMWGPIIANVWWGIPFFAITLLAALQAIPRDLYE 190

Query: 196 AAEMDGANAWQRFRIVTLPAIMPVLATVVTLRTIWMFYMFADVYLLTT------KVDILG 249
           AAE+DGAN +QRF  +TLP + P +A  V LRT+W+   FAD+ ++ T      +  I+ 
Sbjct: 191 AAEIDGANPFQRFTSITLPFLAPTIAITVLLRTVWI-ANFADLIIVMTNGGPADRTQIVA 249

Query: 250 VYLYKTAFAFNDLGKAAAISVVLFIIIFA---VILLTRKRV 287
            Y++  AF   D G A+AI++VL +++ A   +I+L R+R+
Sbjct: 250 SYIFTQAFRRLDFGYASAIALVLLVLLLAYSMLIVLLRQRL 290