Pairwise Alignments

Query, 293 a.a., predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

Subject, 286 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score =  127 bits (318), Expect = 4e-34
 Identities = 81/277 (29%), Positives = 139/277 (50%), Gaps = 15/277 (5%)

Query: 14  ALLLLAPSLLLLGGLVAWPMVSNIEISFLRLPLNPNIESTFVGVSNYVRILSDPGFWHSL 73
           A   LAP LL+      WP++S+  +SF    +NP     F    N+ R++SDP F+++L
Sbjct: 8   AYAFLAPYLLIFATFWVWPIISSFMLSFQNTRINP---WRFAPSMNWGRLVSDPAFYNAL 64

Query: 74  WMTVWYTALVVAGSTVLGLAVAMFFNREF-RLRKTARSLVILSYVTPSISLVFAWKYMFN 132
           + T+    + V     L   +A+  N    ++R   R       V   ++    ++ MF+
Sbjct: 65  YNTLIILVIQVPVMIALATVMAVLLNSPLLKVRPLYRFAFFAPVVVGEVAYAAVFRLMFS 124

Query: 133 NGYGIVNYLGVDLLHLYEQAPL-WFDNPGSSFVLVVLFAIWRYFPYAFISFLAILQTIDK 191
             +GI+N     L+     +P+ WFDN  ++  LV++   WR+  Y  I  LA LQ+I  
Sbjct: 125 ADFGIIN----KLITSVGLSPISWFDNANAAMALVIIAVTWRWAGYNAIIILAGLQSIPG 180

Query: 192 SLYEAAEMDGANAWQRFRIVTLPAIMPVLATVVTLRTIWMFYMFADVYLLTTK------V 245
            +YEAA +D  +  Q+F  +TLP + P++   V L  I    +FA+ +L+T +       
Sbjct: 181 DVYEAATLDKVSKRQQFFHITLPLLKPIILFCVVLSVIGTMQLFAEPFLITNRGGPGGGT 240

Query: 246 DILGVYLYKTAFAFNDLGKAAAISVVLFIIIFAVILL 282
           + LG++LY+  F   + G A+AI+  +  +  A+ LL
Sbjct: 241 ETLGLFLYRQGFTSLNFGYASAIAYTMAALAIAISLL 277