Pairwise Alignments

Query, 293 a.a., predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

Subject, 293 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score =  116 bits (290), Expect = 7e-31
 Identities = 90/288 (31%), Positives = 149/288 (51%), Gaps = 20/288 (6%)

Query: 18  LAPSLLLLGGLVAWPMVSNIEISFLRLPLNPNIESTFVGVSNYVRILS-DPGFWHSLWMT 76
           L P ++ L    A P + ++ +SF R  L    + T+ G++NY R+ + D  F  SL +T
Sbjct: 12  LTPYIVGLLVFTAIPFLGSLYLSFTRYDLMS--DPTWAGLANYERLFTRDRTFMKSLNVT 69

Query: 77  VWYTALVVAGSTVLGLAVAMFFNREFRLRKTARS-LVILSYVTPSISLVFAWKYMFNNGY 135
           ++Y  L V       L +A   N + +     R+   + S +  SI++   W+Y+F +  
Sbjct: 70  LFYVFLTVPLKLAFALFIAAILNYKLQFINFFRTAFYVPSILGGSIAIAVLWRYIFASE- 128

Query: 136 GIVNYLGVDLLHLYEQAPL-WFDNPGSSFVLVVLFAIWRYFPYAFISFLAILQTIDKSLY 194
           G+ N      L     +P+ WF +PG++   + L   W+ F  A + FLA LQ+IDKSLY
Sbjct: 129 GLANMA----LAAIGLSPVDWFGDPGNALFTITLLRCWQ-FGSAMVIFLAALQSIDKSLY 183

Query: 195 EAAEMDGANAWQRFRIVTLPAIMPVLATVVTLRTIWMFYMFADVYLLT-----TKVDILG 249
           EAA +DGA   + F  +TLP + PV+   + ++ +  F  F   Y++T         +L 
Sbjct: 184 EAAAIDGAGKVKTFFFITLPLLTPVIFFNLIMQMVQAFQEFNGPYIITQGGPLKSTYLLP 243

Query: 250 VYLYKTAFAFNDLGKAAAISVVLFIIIFAVILL----TRKRVNLNGNK 293
           +Y+Y  AF   ++G A+AI+ VLF II  + L+    ++K V   G+K
Sbjct: 244 LYIYDEAFKKFNMGYASAIAWVLFTIITVLTLVAFWSSKKWVYYAGDK 291