Pairwise Alignments

Query, 293 a.a., predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

Subject, 295 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score =  118 bits (296), Expect = 1e-31
 Identities = 86/272 (31%), Positives = 142/272 (52%), Gaps = 15/272 (5%)

Query: 14  ALLLLAPSLLLLGGLVAWPMVSNIEISFLRLPLNPNIESTFVGVSNYVRILS-DPGFWHS 72
           A L L P L+   GL   P ++++ +SF    L  + +  +VG +NYVRI + DP F  +
Sbjct: 11  AYLFLLPWLIGFFGLTLGPALASLYLSFTNYDLLQSPD--WVGAANYVRIATADPKFAAA 68

Query: 73  LWMTVWYTALVVAGSTVLGLAVAMFFNREFRLRKTARSLVIL-SYVTPSISLVFAWKYMF 131
           + +T  Y  L V    +  L VA+ FNR  R     R++  L S +  S+++   W+ +F
Sbjct: 69  MQVTFTYVLLSVPLKLIFALLVALAFNRGIRGLTLYRAIFYLPSLLGSSVAIAVLWRQLF 128

Query: 132 NNGYGIVNYLGVDLLHLYEQAPLWFDNPGSSFVLVVLFAIWRYFPYAFISFLAILQTIDK 191
            +  G+VN +         + P W  NP  S   +V+ ++W+ F    I FLA L+ I +
Sbjct: 129 ASD-GLVNMILWQAFGY--EGPSWISNPDYSIYTLVILSVWQ-FGSPMIIFLAGLRQIPQ 184

Query: 192 SLYEAAEMDGANAWQRFRIVTLPAIMPVLATVVTLRTIWMFYMFADVYLLT-------TK 244
            +YEAAE+DGA+  ++F  +TLP + PV+     ++TI  F  F   ++++         
Sbjct: 185 DMYEAAEIDGASKVRQFFRITLPLLTPVIFFNAVIQTIDAFKAFTPAFIISEGTGGPINS 244

Query: 245 VDILGVYLYKTAFAFNDLGKAAAISVVLFIII 276
                +YLY+ AF F  +G A+A++ +L III
Sbjct: 245 TLFYTLYLYQEAFGFFRMGYASALAWILVIII 276