Pairwise Alignments

Query, 547 a.a., predicted antimicrobial peptide transporter subunit (NCBI) from Escherichia coli BW25113

Subject, 550 a.a., peptide ABC transporter substrate-binding protein SapA from Serratia liquefaciens MT49

 Score =  858 bits (2218), Expect = 0.0
 Identities = 417/541 (77%), Positives = 473/541 (87%), Gaps = 1/541 (0%)

Query: 7   SLLVIAGLVSGQAIAAPESP-PHADIRDSGFVYCVSGQVNTFNPSKASSGLIVDTLAAQF 65
           SL  +AG        AP +  P  DIR SGFVYCVSG +NTFNP  ASSGL VDTLAAQ 
Sbjct: 10  SLSCLAGSALASTPPAPTAASPLPDIRQSGFVYCVSGILNTFNPQMASSGLTVDTLAAQL 69

Query: 66  YDRLLDVDPYTYRLMPELAESWEVLDNGATYRFHLRRDVPFQKTDWFTPTRKMNADDVVF 125
           YDRLLDVDPYTYRL+PELA+SWEVLDNGATYRFHLR+DVPFQ TDWF PTRK+NADDVVF
Sbjct: 70  YDRLLDVDPYTYRLIPELAQSWEVLDNGATYRFHLRKDVPFQTTDWFKPTRKLNADDVVF 129

Query: 126 TFQRIFDRNNPWHNVNGSNFPYFDSLQFADNVKSVRKLDNHTVEFRLAQPDASFLWHLAT 185
           +F+R+F++ +P+H+VNG  +PYFDSLQF D+V+SV+KLD +TVE RL  PDASFLWH+AT
Sbjct: 130 SFERVFNQKHPYHDVNGGEYPYFDSLQFGDSVQSVKKLDEYTVEIRLQAPDASFLWHIAT 189

Query: 186 HYASVMSAEYARKLEKEDRQEQLDRQPVGTGPYQLSEYRAGQFIRLQRHDDFWRGKPLMP 245
           HYA V+SAEYA  L +E RQE +DR+PVGTGP+ L+EYR+GQ+IRL R+D +W+GKP MP
Sbjct: 190 HYAPVLSAEYADDLTREGRQEMIDREPVGTGPFMLNEYRSGQYIRLARNDVYWKGKPRMP 249

Query: 246 QVVVDLGSGGTGRLSKLLTGECDVLAWPAASQLSILRDDPRLRLTLRPGMNVAYLAFNTA 305
           QVV+DLG+GGTGRLSKLLTGECDVLA+PAASQLSILRDDPRLRLTLRPGMN+AYLAFNT 
Sbjct: 250 QVVIDLGAGGTGRLSKLLTGECDVLAYPAASQLSILRDDPRLRLTLRPGMNIAYLAFNTR 309

Query: 306 KPPLNNPAVRHALALAINNQRLMQSIYYGTAETAASILPRASWAYDNEAKITEYNPAKSR 365
           KPPLN+  VR A++LAINNQRLMQSIYYGTAETAASILPRASWAYDNEA +TE+NPAKSR
Sbjct: 310 KPPLNDLNVRQAISLAINNQRLMQSIYYGTAETAASILPRASWAYDNEAHVTEFNPAKSR 369

Query: 366 EQLKSLGLENLTLKLWVPTRSQAWNPSPLKTAELIQADMAQVGVKVVIVPVEGRFQEARL 425
           E LK  G+E+L L+LWVPT SQ++NPSPLKTAELIQAD+AQVG+ V IVPVEGRFQEARL
Sbjct: 370 EMLKQAGIESLNLRLWVPTASQSYNPSPLKTAELIQADLAQVGINVTIVPVEGRFQEARL 429

Query: 426 MDMSHDLTLSGWATDSNDPDSFFRPLLSCAAIHSQTNLAHWCDPKFDSVLRKALSSQQLA 485
           M+M+HDLTL+GWATDSNDPDSFFRPLLSCAAI SQTN AHWCDP FD VL+ AL SQQLA
Sbjct: 430 MEMNHDLTLTGWATDSNDPDSFFRPLLSCAAIRSQTNYAHWCDPAFDEVLQNALLSQQLA 489

Query: 486 ARIEAYDEAQSILAQELPILPLASSLRLQAYRYDIKGLVLSPFGNASFAGVYREKQDEVK 545
            RIE Y +AQ IL Q+LP+LPLASSLRLQAYRYDIKGLVLSPFGNASFAGVYRE  +  K
Sbjct: 490 QRIENYQKAQKILEQQLPVLPLASSLRLQAYRYDIKGLVLSPFGNASFAGVYRESAEGPK 549

Query: 546 K 546
           K
Sbjct: 550 K 550