Pairwise Alignments

Query, 547 a.a., predicted antimicrobial peptide transporter subunit (NCBI) from Escherichia coli BW25113

Subject, 511 a.a., Peptide transport periplasmic protein SapA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  958 bits (2477), Expect = 0.0
 Identities = 468/511 (91%), Positives = 493/511 (96%)

Query: 37  VYCVSGQVNTFNPSKASSGLIVDTLAAQFYDRLLDVDPYTYRLMPELAESWEVLDNGATY 96
           VYCVSGQVNTFNP KASSGLIVDTLAAQ YDRLLDVDPYTYRL+PELAESWEVLDNGATY
Sbjct: 1   VYCVSGQVNTFNPQKASSGLIVDTLAAQLYDRLLDVDPYTYRLVPELAESWEVLDNGATY 60

Query: 97  RFHLRRDVPFQKTDWFTPTRKMNADDVVFTFQRIFDRNNPWHNVNGSNFPYFDSLQFADN 156
           RFHLRRDV FQKT WFTPTRK+NADDVVFTFQRIFDR +PWHN+NGS+FPYFDSLQFADN
Sbjct: 61  RFHLRRDVSFQKTAWFTPTRKLNADDVVFTFQRIFDRRHPWHNINGSSFPYFDSLQFADN 120

Query: 157 VKSVRKLDNHTVEFRLAQPDASFLWHLATHYASVMSAEYARKLEKEDRQEQLDRQPVGTG 216
           VKSVRKLDN+TVEFRL QPDASFLWHLATHYASVMSAEYA +L ++DRQE LDRQPVGTG
Sbjct: 121 VKSVRKLDNNTVEFRLTQPDASFLWHLATHYASVMSAEYAAQLSRKDRQELLDRQPVGTG 180

Query: 217 PYQLSEYRAGQFIRLQRHDDFWRGKPLMPQVVVDLGSGGTGRLSKLLTGECDVLAWPAAS 276
           P+QLSEYRAGQFIRLQRHD FWRGKPLMPQVVVDLGSGGTGRLSKLLTGECDVLAWPAAS
Sbjct: 181 PFQLSEYRAGQFIRLQRHDGFWRGKPLMPQVVVDLGSGGTGRLSKLLTGECDVLAWPAAS 240

Query: 277 QLSILRDDPRLRLTLRPGMNVAYLAFNTAKPPLNNPAVRHALALAINNQRLMQSIYYGTA 336
           QL+ILRDDPRLRLTLRPGMN+AYLAFNT KPPLNNPAVRHALAL+INNQRLMQSIYYGTA
Sbjct: 241 QLTILRDDPRLRLTLRPGMNIAYLAFNTDKPPLNNPAVRHALALSINNQRLMQSIYYGTA 300

Query: 337 ETAASILPRASWAYDNEAKITEYNPAKSREQLKSLGLENLTLKLWVPTRSQAWNPSPLKT 396
           ETAASILPRASWAYDN+AKITEYNP KSREQLK+LG+ENLTL LWVPT SQAWNPSPLKT
Sbjct: 301 ETAASILPRASWAYDNDAKITEYNPQKSREQLKALGIENLTLHLWVPTSSQAWNPSPLKT 360

Query: 397 AELIQADMAQVGVKVVIVPVEGRFQEARLMDMSHDLTLSGWATDSNDPDSFFRPLLSCAA 456
           AELIQADMAQVGVKVVIVPVEGRFQEARLMDM+HDLTLSGWATDSNDPDSFFRPLLSCAA
Sbjct: 361 AELIQADMAQVGVKVVIVPVEGRFQEARLMDMNHDLTLSGWATDSNDPDSFFRPLLSCAA 420

Query: 457 IHSQTNLAHWCDPKFDSVLRKALSSQQLAARIEAYDEAQSILAQELPILPLASSLRLQAY 516
           I+SQTN AHWC+P+FDSVLRKALSSQQLA+RIEAY+EAQ+IL +ELPILPLASSLRLQAY
Sbjct: 421 INSQTNFAHWCNPEFDSVLRKALSSQQLASRIEAYEEAQNILEKELPILPLASSLRLQAY 480

Query: 517 RYDIKGLVLSPFGNASFAGVYREKQDEVKKP 547
           RYDIKGLVLSPFGNASFAGV REK +EVKKP
Sbjct: 481 RYDIKGLVLSPFGNASFAGVSREKHEEVKKP 511