Pairwise Alignments

Query, 661 a.a., modulator of Rnase II stability (NCBI) from Escherichia coli BW25113

Subject, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  360 bits (925), Expect = e-103
 Identities = 211/565 (37%), Positives = 328/565 (58%), Gaps = 16/565 (2%)

Query: 102  VARDLSH------GLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQS 155
            V RD+S        L  A  V   + SAI+I D  G I + N      +G    +V+ Q 
Sbjct: 701  VGRDISQQRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVSEVLDQL 760

Query: 156  VFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIF 215
               L +  ++    R   +   + G+ +E E+W+    G     +           +   
Sbjct: 761  PGMLTVDEQQEGHLRYVVKQLHQRGS-WEGEVWLKRRDGDHYPAWVGITAVLDDEGDLAS 819

Query: 216  LICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGVV--YLD 273
             +C  TDI+E + +++R+  LA  D++T LPNR   QD + +A+  A+  K  VV  +LD
Sbjct: 820  YVCFFTDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLYNALQQAERQKAWVVLMFLD 879

Query: 274  LDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN--TSQSALE 331
            LD FK +ND+ GH  GD++L+D++L +L+C++ D  +AR GGDEF +L     T + AL 
Sbjct: 880  LDRFKPINDSLGHAAGDRMLKDMALRLLACVDDDDTVARMGGDEFTLLLQPRPTREMALN 939

Query: 332  A---MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGG 388
                +A  IL  L  PF +   E + + S+GIALSP+ GS+ + ++++ADTAMY AKE G
Sbjct: 940  RAIHVAENILGSLVRPFVLENREFFVTASIGIALSPQDGSELSQLMKNADTAMYHAKERG 999

Query: 389  RGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQS 447
            +  F  +  EMN    E L L+++LR A+E ++ +++YQP+ +  G+ +   EAL+RW+ 
Sbjct: 1000 KNNFQFYQAEMNASALERLELESDLRHAMEQNEFILYYQPQFSGDGKRLTGAEALLRWRH 1059

Query: 448  PERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLAD 506
            P RGL+PP DFI   EE GL+V +G WV+ +  RQ+  W    + + +V+VNISARQ +D
Sbjct: 1060 PTRGLVPPGDFIPVIEELGLVVDVGDWVLREASRQLKAWHKAKVRVPKVSVNISARQFSD 1119

Query: 507  QTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGY 566
              + T +  +L+E       +++ELTES L+     AL ++     LG  + +DDFGTGY
Sbjct: 1120 GQLGTRIANILEESGLPPACLELELTESILMREVNEALQILASLKNLGLSIAVDDFGTGY 1179

Query: 567  SSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDA 626
            SSL+ L +FPID +K+D+ FV  + +      + RAI+A+A +LNL VIAEGVE+ ++  
Sbjct: 1180 SSLNYLKQFPIDVLKIDRTFVDGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLE 1239

Query: 627  FLTKNGINERQGFLFAKPMPAVAFE 651
            FL ++G +E QG+LF +PMPA  FE
Sbjct: 1240 FLREHGCDEVQGYLFGRPMPAHQFE 1264