Pairwise Alignments

Query, 306 a.a., oligopeptide permease ABC transporter membrane protein (NCBI) from Escherichia coli BW25113

Subject, 306 a.a., Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  580 bits (1494), Expect = e-170
 Identities = 294/306 (96%), Positives = 300/306 (98%)

Query: 1   MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGERTLPPEVMANIEAKYHLNDPIM 60
           MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGER LPPEV+ANIEAKYHLNDPIM
Sbjct: 1   MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGERALPPEVLANIEAKYHLNDPIM 60

Query: 61  TQYFSYLKQLAHGDFGPSFKYKDYSVNDLVASSFPVSAKLGAAAFFLAVILGVSAGVIAA 120
           TQYFSYLKQLAHGDFGPSFKYKDY+VNDLVA+SFPVSAKLGAAAF LAVI+GVSAGVIAA
Sbjct: 61  TQYFSYLKQLAHGDFGPSFKYKDYTVNDLVAASFPVSAKLGAAAFLLAVIIGVSAGVIAA 120

Query: 121 LKQNTKWDYTVMGLAMTGVVIPSFVVAPLLVMIFAIILHWLPGGGWNGGALKFMILPMVA 180
           LKQNT+WDYTVMG AMTGVVIPSFVVAPLLVM+FAI L WLPGGGWNGGALKFMILPMVA
Sbjct: 121 LKQNTRWDYTVMGFAMTGVVIPSFVVAPLLVMVFAITLQWLPGGGWNGGALKFMILPMVA 180

Query: 181 LSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRRIILRHALKPALLPVLSYMGPAF 240
           LSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRRII RHALKPALLPVLSYMGPAF
Sbjct: 181 LSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRRIIFRHALKPALLPVLSYMGPAF 240

Query: 241 VGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVLSLTILVGALTILFNAIVDVLYAVI 300
           VGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVLSLTILVGALTILFNAIVDVLYAVI
Sbjct: 241 VGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVLSLTILVGALTILFNAIVDVLYAVI 300

Query: 301 DPKIRY 306
           DPKIRY
Sbjct: 301 DPKIRY 306