Pairwise Alignments

Query, 306 a.a., oligopeptide permease ABC transporter membrane protein (NCBI) from Escherichia coli BW25113

Subject, 339 a.a., dipeptide/heme ABC transporter permease from Escherichia coli BL21

 Score =  195 bits (496), Expect = 1e-54
 Identities = 117/338 (34%), Positives = 184/338 (54%), Gaps = 33/338 (9%)

Query: 1   MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP---FTGERTLPPEVMANIEAKYHLND 57
           ML+FILRR    IPT   +  ++F  + + PG P     GER + PE  A + A+  L+ 
Sbjct: 1   MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60

Query: 58  PIMTQYFSYLKQLAHGDFGPSFKYKDYSVNDLVASSFPVSAKLGAAAFFLAVILGVSAGV 117
           P+  QY  Y+  + HGD G S K +   V +     F  + +LG  A   A  +G+  GV
Sbjct: 61  PMWQQYLHYIWGVMHGDLGISMKSR-IPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119

Query: 118 IAALKQNTKWDYTVMGLAMTGVVIPSFVVAPLLVMIFAIILHWLPGGG------------ 165
           +AA+K+ + +D+T +GLA+TG  +P F    +L+M+ ++  +  P  G            
Sbjct: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179

Query: 166 ------------WNGG-----ALKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRT 208
                       W        A+  MILP + L    +A I R+TR SM+EVL  ++IRT
Sbjct: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239

Query: 209 ARAKGLPMRRIILRHALKPALLPVLSYMGPAFVGIITGSMVIETIYGLPGIGQLFVNGAL 268
           ARAKGL   R+I+ HAL+ A+LPV++ +G     ++ G+++ ETI+  PG+G+  ++   
Sbjct: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299

Query: 269 NRDYSLVLSLTILVGALTILFNAIVDVLYAVIDPKIRY 306
            RDY +V    +LV  + IL N +VD+LY V++P+IR+
Sbjct: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337