Pairwise Alignments

Query, 1247 a.a., nitrate reductase 1, alpha subunit (NCBI) from Escherichia coli BW25113

Subject, 814 a.a., Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 87.8 bits (216), Expect = 3e-21
 Identities = 88/348 (25%), Positives = 140/348 (40%), Gaps = 65/348 (18%)

Query: 43  DKIVRSTHGVNCTGSCSWKIYVKNGLVTW-ETQQT---DYPRTRPDLPNHEPRGCPRGAS 98
           +K+V S   VNC   C  +++V +G + + ET  T   DY         H+ R C RG S
Sbjct: 56  EKVVWSACTVNCGSRCPLRMHVVDGEIKYVETDNTGNDDYDGL------HQVRACLRGRS 109

Query: 99  YSWYLYSANRLKYPMMRKRLMKMWREAKALHSDPVEAWASIIEDADKAKSFKQARGRGGF 158
               +Y+ +RLKYPM R                                    ARG G F
Sbjct: 110 MRRRVYNPDRLKYPMKRVG----------------------------------ARGEGKF 135

Query: 159 VRSSWQEVNELIAASNVYTIKNYGPDRV---AGFSPIPAMSMVSYASGARYLSLIGGTCL 215
            R SW E  ++IA +    IK YG + +    G   +      S+  G   ++ +   C 
Sbjct: 136 ERISWDEAYDIIATNMQRLIKEYGNESIYLNYGTGTLGGTLTRSWPPGKTLVARLMNCCG 195

Query: 216 SFYDWYCDLPPAS-----PQTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPD---AHF 267
            + + Y D   A        T+G   D    +D  NS  ++ +G+N  +TR       ++
Sbjct: 196 GYLNHYGDYSSAQIAAGLNYTYGGWADGNSPSDIENSKLVVLFGNNPGETRMSGGGVTYY 255

Query: 268 FTEVRYK-GTKTVAVTPDYAEI-AKLCDLWLAPKQGTDAAMALAMGHVMLREFHLDNPSQ 325
             + R K   + + + P Y +  A   D W+  + GTDAA+   + +V++ E  +D P  
Sbjct: 256 LEQARQKSNARMIIIDPRYTDTGAGREDEWIPIRPGTDAALVNGLAYVLITENMVDQP-- 313

Query: 326 YFTDYVRRYTDMPMLVMLEERDGYYAAGRMLRAADLVDALGQENNPEW 373
           +   Y   Y D   L     ++G+Y A  + +  D     G    PEW
Sbjct: 314 FLDKYCVGY-DEKTLPASAPKNGHYKAYILGQGKD-----GIAKTPEW 355



 Score = 38.1 bits (87), Expect = 3e-06
 Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 6/103 (5%)

Query: 1093 HQKWGIHSTYSDNLLMLTLGRGGPVVWLSEADAKDLGIADNDWIEVFNSNGALTARAVVS 1152
            H K  +HSTY +  ++    R    +W++  DA+  GI + D + +FN  G +   A V+
Sbjct: 701  HYKARVHSTYGNVDVLKAACR--QEMWINPMDAQKRGINNGDKVRIFNDRGEVHIEAKVT 758

Query: 1153 QRVPAGMTMMYHAQERIVNLPGSEITQQRGGIHNSVTRITPKP 1195
             R+  G+  +    E     P ++   Q GG  N +T   P P
Sbjct: 759  PRMMPGVVAL---GEGAWYDPDAKRVDQ-GGCINVLTTQRPSP 797



 Score = 37.0 bits (84), Expect = 7e-06
 Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 5/72 (6%)

Query: 502 AYTPAWAEQITGVSRSQIIRIAREFADNADKTHGRSMIIVGAGLNHWYHLDMNYRGLINM 561
           A TP WA QITG+   +II++ARE           + I  G G     + ++  R +  +
Sbjct: 350 AKTPEWAAQITGIPADRIIKLAREIGSAKP-----AYICQGWGPQRHANGEIATRAISML 404

Query: 562 LIFCGCVGQSGG 573
            I  G VG +GG
Sbjct: 405 AILTGNVGINGG 416



 Score = 35.4 bits (80), Expect = 2e-05
 Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 3/72 (4%)

Query: 765 KLDLVVTLDFRLSSTCLYSDIILPTATWYEKDDM---NTSDMHPFIHPLSAAVDPAWEAK 821
           K +++V +D  ++S+  Y+DI+LP  T  E+ D     +     ++     A+ P +E K
Sbjct: 505 KCEMIVVIDCHMTSSAKYADILLPDCTASEQMDFALDASCGNMSYVIFTDQAIKPRFECK 564

Query: 822 SDWEIYKAIAKK 833
           + +E+   +AK+
Sbjct: 565 TIYEMTSELAKR 576