Pairwise Alignments

Query, 1247 a.a., nitrate reductase 1, alpha subunit (NCBI) from Escherichia coli BW25113

Subject, 1246 a.a., Respiratory nitrate reductase alpha chain (EC 1.7.99.4) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 2143 bits (5553), Expect = 0.0
 Identities = 990/1248 (79%), Positives = 1119/1248 (89%), Gaps = 3/1248 (0%)

Query: 1    MSKFLDRFRYFKQKGETFADGHGQLLNTNRDWEDGYRQRWQHDKIVRSTHGVNCTGSCSW 60
            MSK LDRFRYFKQKG+TFADGHGQ+++TNRDWED YRQRWQ DKIVRSTHGVNCTGSCSW
Sbjct: 1    MSKLLDRFRYFKQKGDTFADGHGQVMHTNRDWEDSYRQRWQFDKIVRSTHGVNCTGSCSW 60

Query: 61   KIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPMMRKRLMK 120
            KIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYP++RKRL++
Sbjct: 61   KIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPLVRKRLIE 120

Query: 121  MWREAKALHSDPVEAWASIIEDADKAKSFKQARGRGGFVRSSWQEVNELIAASNVYTIKN 180
            +WREA + HSDPV AW SI+ D  K +S+KQ RG GGF+RS+W+E+N+LIAA+NV+TIK 
Sbjct: 121  LWREALSRHSDPVLAWESIMNDPQKCQSYKQVRGHGGFIRSNWKELNQLIAAANVWTIKT 180

Query: 181  YGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFYDWYCDLPPASPQTWGEQTDVPE 240
            YGPDRVAGFSPIPAMSMVSYA+G RYLSL+GGTCLSFYDWYCDLPPASP TWGEQTDVPE
Sbjct: 181  YGPDRVAGFSPIPAMSMVSYAAGTRYLSLLGGTCLSFYDWYCDLPPASPMTWGEQTDVPE 240

Query: 241  SADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAVTPDYAEIAKLCDLWLAPKQ 300
            SADWYNS+YIIAWGSNVPQTRTPDAHFFTEVRYKGTKT+A+TPDY+E+AKLCD WLAPKQ
Sbjct: 241  SADWYNSAYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTIAITPDYSEVAKLCDQWLAPKQ 300

Query: 301  GTDAAMALAMGHVMLREFHLDNPSQYFTDYVRRYTDMPMLVMLEER-DGYYAAGRMLRAA 359
            GTD+A+A+AMGHV+L+EFHLDNPS YF +Y RRYTDMPMLV+L+ER DG Y  GRM+RA+
Sbjct: 301  GTDSALAMAMGHVILKEFHLDNPSDYFLNYCRRYTDMPMLVLLDERADGSYVPGRMMRAS 360

Query: 360  DLVDALGQENNPEWKTVAFNTNGEMVAPNGSIGFRWGEKGKWNLEQRDGKTGEETELQLS 419
            DLVD LG+ NNPEWKTVA N+ GE+VAPNGSIGFRWGEKGKWNLE      G ETEL LS
Sbjct: 361  DLVDGLGEANNPEWKTVALNSTGELVAPNGSIGFRWGEKGKWNLEPV--AAGVETELSLS 418

Query: 420  LLGSQDEIAEVGFPYFGGDGTEHFNKVELENVLLHKLPVKRLQLADGSTALVTTVYDLTL 479
            LLG  D++A V FPYFGG+   HF  V  E VL+ +LPVKRL LADGS  +V +VYDL L
Sbjct: 419  LLGQHDDVAGVAFPYFGGNENPHFRSVRQEPVLVRQLPVKRLALADGSERMVVSVYDLVL 478

Query: 480  ANYGLERGLNDVNCATSYDDVKAYTPAWAEQITGVSRSQIIRIAREFADNADKTHGRSMI 539
            ANYGL+RGL+D + A +Y+DVKAYTPAW EQITGV R  I  IAREFA+ A KTHGRSMI
Sbjct: 479  ANYGLDRGLDDGHSANNYNDVKAYTPAWGEQITGVPRRHIETIAREFAETAHKTHGRSMI 538

Query: 540  IVGAGLNHWYHLDMNYRGLINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDW 599
            I+GAG+NHWYH+DMNYRG+INML+FCGCVGQ+GGGWAHYVGQEKLRPQTGW PLAFALDW
Sbjct: 539  ILGAGVNHWYHMDMNYRGMINMLVFCGCVGQTGGGWAHYVGQEKLRPQTGWLPLAFALDW 598

Query: 600  QRPARHMNSTSYFYNHSSQWRYETVTAEELLSPMADKSRYTGHLIDFNVRAERMGWLPSA 659
             RP R MNSTS+FYNH+SQWRYE +TA+ELLSP+AD ++++GHLIDFNVRAERMGWLPSA
Sbjct: 599  NRPPRQMNSTSFFYNHASQWRYEKLTAQELLSPLADPAKFSGHLIDFNVRAERMGWLPSA 658

Query: 660  PQLGTNPLTIAGEAEKAGMNPVDYTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLLG 719
            PQL  NPL++   A+KAG++  DYTV++LK G+IRFA EQP++G NHPRNLF+WRSNLLG
Sbjct: 659  PQLNLNPLSVKASADKAGLSAADYTVQALKSGAIRFACEQPDSGHNHPRNLFVWRSNLLG 718

Query: 720  SSGKGHEFMLKYLLGTEHGIQGKDLGQQGGVKPEEVDWQDNGLEGKLDLVVTLDFRLSST 779
            SSGKGHE+MLKYLLGT+ GIQG+ LG   G+KPEEV+WQ   +EGKLDL+VTLDFR+SST
Sbjct: 719  SSGKGHEYMLKYLLGTDSGIQGEALGSSEGIKPEEVEWQSTAIEGKLDLLVTLDFRMSST 778

Query: 780  CLYSDIILPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWEAKSDWEIYKAIAKKFSEVCV 839
            CL+SDI+LPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWE+KSDWEIYK IA  FSEVCV
Sbjct: 779  CLFSDIVLPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWESKSDWEIYKGIASVFSEVCV 838

Query: 840  GHLGKETDIVTLPIQHDSAAELAQPLDVKDWKKGECDLIPGKTAPHIMVVERDYPATYER 899
            GHLG+ETD+V  P+QHDS AELAQP D+ DW+KGEC+LIPGKTAP+I+VVERDYPATYER
Sbjct: 839  GHLGQETDVVLHPLQHDSPAELAQPFDILDWRKGECELIPGKTAPNIVVVERDYPATYER 898

Query: 900  FTSIGPLMEKIGNGGKGIAWNTQSEMDLLRKLNYTKAEGPAKGQPMLNTAIDAAEMILTL 959
            FTS+GPL++K+GNGGKGIAWNTQ E+D L KLNYTK +GPAKG+P ++TA+DA+E+IL L
Sbjct: 899  FTSLGPLLDKLGNGGKGIAWNTQDEVDFLGKLNYTKHDGPAKGRPRIDTALDASEVILAL 958

Query: 960  APETNGQVAVKAWAALSEFTGRDHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLEDE 1019
            APETNGQVAVKAW AL E TGR+HTHLA+NKEDEKIRFRDIQAQPRKIISSPTWSGLE E
Sbjct: 959  APETNGQVAVKAWQALGEMTGREHTHLAINKEDEKIRFRDIQAQPRKIISSPTWSGLESE 1018

Query: 1020 HVSYNAGYTNVHELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKEVIGQKS 1079
            HVSYNAGYTNVHELIPWRTLSGRQQLYQDH WMR FGESL+ YRPPIDTRSV E+     
Sbjct: 1019 HVSYNAGYTNVHELIPWRTLSGRQQLYQDHAWMRAFGESLVAYRPPIDTRSVSEMREIPP 1078

Query: 1080 NGNQEKALNFLTPHQKWGIHSTYSDNLLMLTLGRGGPVVWLSEADAKDLGIADNDWIEVF 1139
            NG  EKALNFLTPHQKWGIHSTYS+NLLMLTL RGGP+VW+SEADA++LGI DNDWIE F
Sbjct: 1079 NGFPEKALNFLTPHQKWGIHSTYSENLLMLTLSRGGPIVWISEADARELGIEDNDWIEAF 1138

Query: 1140 NSNGALTARAVVSQRVPAGMTMMYHAQERIVNLPGSEITQQRGGIHNSVTRITPKPTHMI 1199
            N+NGALTARAVVSQRVP GMTMMYHAQERI+N+PGSE+T  RGGIHNSVTR+ PKPTHMI
Sbjct: 1139 NANGALTARAVVSQRVPPGMTMMYHAQERIMNIPGSEVTGMRGGIHNSVTRVCPKPTHMI 1198

Query: 1200 GGYAHLAYGFNYYGTVGSNRDEFVVVRKMKNIDWLDGEGNDQVQESVK 1247
            GGYA LAYGFNYYGTVGSNRDEF+++RKMKNI+WLD EG DQVQE+ K
Sbjct: 1199 GGYAQLAYGFNYYGTVGSNRDEFIMIRKMKNINWLDDEGRDQVQEAKK 1246