Pairwise Alignments

Query, 1247 a.a., nitrate reductase 1, alpha subunit (NCBI) from Escherichia coli BW25113

Subject, 808 a.a., oxidoreductase subunit (NCBI) from Escherichia coli BW25113

 Score = 87.0 bits (214), Expect = 6e-21
 Identities = 91/324 (28%), Positives = 137/324 (42%), Gaps = 57/324 (17%)

Query: 43  DKIVRSTHGVNCTGSCSWKIYVKNGLVTW-ETQQTDYPRTRPDLPNHEPRGCPRGASYSW 101
           +K+V     VNC   C+ +++VK+  VTW ET  T       +  NH+ R C RG S   
Sbjct: 49  EKVVWGACSVNCGSRCALRLHVKDNEVTWVETDNTG----SDEYGNHQVRACLRGRSIRR 104

Query: 102 YLYSANRLKYPMMRKRLMKMWREAKALHSDPVEAWASIIEDADKAKSFKQARGRGGFVRS 161
            +   +RL YPM  KR+ K                                RG G F R 
Sbjct: 105 RINHPDRLNYPM--KRVGK--------------------------------RGEGKFERI 130

Query: 162 SWQEVNELIAASNVYTIKNYGPDRV--AGFSPIPAMSMVSYASGA----RYLSLIGGTCL 215
           SW E  + IA+S   T++ YG + V     S I   +M   +  A    R ++  GG+ L
Sbjct: 131 SWDEALDTIASSLKKTVEQYGNEAVYIQYSSGIVGGNMTRSSPSASAVKRLMNCYGGS-L 189

Query: 216 SFYDWY--CDLPPASPQTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPD---AHFFTE 270
           + Y  Y    +  A P T+G   D   + D  NS  ++ +G+N  +TR       +   +
Sbjct: 190 NQYGSYSTAQISCAMPYTYG-SNDGNSTTDIENSKLVVMFGNNPAETRMSGGGITYLLEK 248

Query: 271 VRYK-GTKTVAVTPDYAEIAK-LCDLWLAPKQGTDAAMALAMGHVMLREFHLDNPSQYFT 328
            R K   K + + P Y + A    D WL  + GTDAA+   +  V++ E  +D P  +  
Sbjct: 249 AREKSNAKMIVIDPRYTDTAAGREDEWLPIRPGTDAALVAGIAWVLINENLVDQP--FLD 306

Query: 329 DYVRRYTDMPMLVMLEERDGYYAA 352
            Y   Y D   L     ++G+Y A
Sbjct: 307 KYCVGY-DEKTLPADAPKNGHYKA 329



 Score = 54.3 bits (129), Expect = 4e-11
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 4/103 (3%)

Query: 1093 HQKWGIHSTYSDNLLMLTLGRGGPVVWLSEADAKDLGIADNDWIEVFNSNGALTARAVVS 1152
            H K   HSTY +  L+    R    VW++  DA+  GIA+ D + VFN  G +   A V+
Sbjct: 693  HYKSRTHSTYGNIDLLKAACR--QEVWINPIDAQKRGIANGDMVRVFNHRGEVRLPAKVT 750

Query: 1153 QRVPAGMTMMYHAQERIVNLPGSEITQQRGGIHNSVTRITPKP 1195
             R+  G++ M        N+ G +I    GG  N++T + P P
Sbjct: 751  PRILPGVSAMGQGAWHEANMSGDKI--DHGGCVNTLTTLRPSP 791



 Score = 44.3 bits (103), Expect = 4e-08
 Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 5/76 (6%)

Query: 498 DDVKAYTPAWAEQITGVSRSQIIRIAREFADNADKTHGRSMIIVGAGLNHWYHLDMNYRG 557
           DD  A TP WA QITG+   +II++ARE       T   + I  G G     + ++  R 
Sbjct: 336 DDKTAKTPQWASQITGIPEDRIIKLAREIG-----TAKPAYICQGWGPQRQANGELTARA 390

Query: 558 LINMLIFCGCVGQSGG 573
           +  + I  G VG SGG
Sbjct: 391 IAMLPILTGNVGISGG 406



 Score = 30.8 bits (68), Expect = 5e-04
 Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 3/74 (4%)

Query: 763 EGKLDLVVTLDFRLSSTCLYSDIILPTATWYEKDDMNTSDM---HPFIHPLSAAVDPAWE 819
           E K +++V ++  ++S+  Y+DI+LP     E++D+  +D      ++  L       +E
Sbjct: 493 ESKCEMIVVIENFMTSSAKYADILLPDLMTVEQEDIIPNDYAGNMGYLIFLQPVTSEKFE 552

Query: 820 AKSDWEIYKAIAKK 833
            K  + I   +AK+
Sbjct: 553 RKPIYWILSEVAKR 566