Pairwise Alignments

Query, 1247 a.a., nitrate reductase 1, alpha subunit (NCBI) from Escherichia coli BW25113

Subject, 1256 a.a., nitrate reductase subunit alpha from Dickeya dadantii 3937

 Score = 2187 bits (5667), Expect = 0.0
 Identities = 1021/1249 (81%), Positives = 1124/1249 (89%), Gaps = 2/1249 (0%)

Query: 1    MSKFLDRFRYFKQKGETFADGHGQLLNTNRDWEDGYRQRWQHDKIVRSTHGVNCTGSCSW 60
            MSKFLDR RYFKQ  E F+  HGQ LNTNRDWEDGYR RWQHDK+VRSTHGVNCTGSCSW
Sbjct: 1    MSKFLDRLRYFKQLAEPFSGDHGQTLNTNRDWEDGYRSRWQHDKVVRSTHGVNCTGSCSW 60

Query: 61   KIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPMMRKRLMK 120
            KIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPM+RKRLMK
Sbjct: 61   KIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPMVRKRLMK 120

Query: 121  MWREAKALHSDPVEAWASIIEDADKAKSFKQARGRGGFVRSSWQEVNELIAASNVYTIKN 180
            +WREA+  H+DPV+AWASI+ DA K + +KQ RGRGGFVR+ WQEVNELIAA+NVYT K 
Sbjct: 121  LWREARQHHADPVDAWASIVGDASKTQEYKQVRGRGGFVRADWQEVNELIAAANVYTAKT 180

Query: 181  YGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFYDWYCDLPPASPQTWGEQTDVPE 240
            +GPDRV GFSPIPAMSMVSYA+GARYLSL+GG CLSFYDWYCDLPPASPQTWGEQTDVPE
Sbjct: 181  FGPDRVIGFSPIPAMSMVSYAAGARYLSLLGGVCLSFYDWYCDLPPASPQTWGEQTDVPE 240

Query: 241  SADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAVTPDYAEIAKLCDLWLAPKQ 300
            SADWYNSSYIIAWGSNVPQTRTPDAHFF EVRYKGTKTVA+TPDYAEIAKLCD WL PKQ
Sbjct: 241  SADWYNSSYIIAWGSNVPQTRTPDAHFFAEVRYKGTKTVAITPDYAEIAKLCDQWLNPKQ 300

Query: 301  GTDAAMALAMGHVMLREFHLDNPSQYFTDYVRRYTDMPMLVMLEER-DGYYAAGRMLRAA 359
            GTD+A+ALAMGHV+L EFHL  P QYFTDYVRRYTDMPMLV+LE R DG YAAGR+LRAA
Sbjct: 301  GTDSALALAMGHVILNEFHLKQPRQYFTDYVRRYTDMPMLVLLEARADGSYAAGRLLRAA 360

Query: 360  DLVDALGQENNPEWKTVAFNT-NGEMVAPNGSIGFRWGEKGKWNLEQRDGKTGEETELQL 418
            DLV  LGQENNPEWKT+A +   GE+VAP GSIG+RWGE+GKWNLEQR+G    +  LQL
Sbjct: 361  DLVGKLGQENNPEWKTIAIDEPTGELVAPQGSIGYRWGEQGKWNLEQREGSAQRDVNLQL 420

Query: 419  SLLGSQDEIAEVGFPYFGGDGTEHFNKVELENVLLHKLPVKRLQLADGSTALVTTVYDLT 478
            SLLG  DE+  VGFPYFGG  +E+F  V L+ VLLH+LPVKRL LADG  ALVT+VYDLT
Sbjct: 421  SLLGHHDEVVSVGFPYFGGASSENFASVALDEVLLHRLPVKRLTLADGQQALVTSVYDLT 480

Query: 479  LANYGLERGLNDVNCATSYDDVKAYTPAWAEQITGVSRSQIIRIAREFADNADKTHGRSM 538
            LANYG++RGL+D  CAT YD VKAY+PAWAEQITGVSR  IIRIAREFADNADKTHGRSM
Sbjct: 481  LANYGVDRGLDDAQCATDYDQVKAYSPAWAEQITGVSRQNIIRIAREFADNADKTHGRSM 540

Query: 539  IIVGAGLNHWYHLDMNYRGLINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWQPLAFALD 598
            IIVGAG+NHWYHLDMNYRG+INMLIFCGCVGQSGGGWAHYVGQEKLRPQTGW PLAF LD
Sbjct: 541  IIVGAGMNHWYHLDMNYRGIINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWLPLAFGLD 600

Query: 599  WQRPARHMNSTSYFYNHSSQWRYETVTAEELLSPMADKSRYTGHLIDFNVRAERMGWLPS 658
            WQRP RHMNSTS+FYNHSSQWRYET+  +ELLSP+AD SR++G LIDFNVRAERMGWLPS
Sbjct: 601  WQRPPRHMNSTSFFYNHSSQWRYETIAPQELLSPLADSSRFSGSLIDFNVRAERMGWLPS 660

Query: 659  APQLGTNPLTIAGEAEKAGMNPVDYTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLL 718
            APQLG NPL IA +A  AGM+P DYTV  LK G +RFAAEQP+N +N PRNLFIWRSNLL
Sbjct: 661  APQLGANPLRIAEQAAAAGMSPQDYTVAELKAGRLRFAAEQPDNPQNFPRNLFIWRSNLL 720

Query: 719  GSSGKGHEFMLKYLLGTEHGIQGKDLGQQGGVKPEEVDWQDNGLEGKLDLVVTLDFRLSS 778
            GSSGKGHE+MLKYLLGTEHGIQG+DLGQQGGV PEEV+W+  G EGKLDLVVTLDFR+SS
Sbjct: 721  GSSGKGHEYMLKYLLGTEHGIQGQDLGQQGGVTPEEVEWRAQGGEGKLDLVVTLDFRMSS 780

Query: 779  TCLYSDIILPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWEAKSDWEIYKAIAKKFSEVC 838
            TCLYSDI+LPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWE+K+DWEIYK +AK FS VC
Sbjct: 781  TCLYSDIVLPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWESKTDWEIYKGLAKTFSRVC 840

Query: 839  VGHLGKETDIVTLPIQHDSAAELAQPLDVKDWKKGECDLIPGKTAPHIMVVERDYPATYE 898
             GHLG ETD+VTLPIQHDSAAE+AQPL VKDWKKGECDLIPGKTAPHIM VERDYP  Y 
Sbjct: 841  QGHLGVETDVVTLPIQHDSAAEMAQPLGVKDWKKGECDLIPGKTAPHIMTVERDYPNLYS 900

Query: 899  RFTSIGPLMEKIGNGGKGIAWNTQSEMDLLRKLNYTKAEGPAKGQPMLNTAIDAAEMILT 958
            RFTS+GPL++K+GNGGKGI+WNTQ+E+D L++LN  + +GPA G+P ++TAIDAAE+IL+
Sbjct: 901  RFTSLGPLLDKLGNGGKGISWNTQNEVDFLKRLNRVQEDGPAAGRPRIDTAIDAAEVILS 960

Query: 959  LAPETNGQVAVKAWAALSEFTGRDHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLED 1018
            LAPETNGQVAVKAW ALS+ TGRDHTHLA  KE+EKIRFRDIQAQPRKIISSPTWSGLED
Sbjct: 961  LAPETNGQVAVKAWEALSKVTGRDHTHLAHPKEEEKIRFRDIQAQPRKIISSPTWSGLED 1020

Query: 1019 EHVSYNAGYTNVHELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKEVIGQK 1078
            EHVSYNA YTNVHELIPWRT+SGRQQLYQDH+WMR FGESLLVYRPP+DTR+ + ++ +K
Sbjct: 1021 EHVSYNACYTNVHELIPWRTISGRQQLYQDHEWMRAFGESLLVYRPPVDTRAAQPLLNKK 1080

Query: 1079 SNGNQEKALNFLTPHQKWGIHSTYSDNLLMLTLGRGGPVVWLSEADAKDLGIADNDWIEV 1138
             NGN EKALNFLTPHQKWGIHSTYS+NLLMLTLGRGGP+VWLSE DA++L IADNDW+EV
Sbjct: 1081 PNGNPEKALNFLTPHQKWGIHSTYSENLLMLTLGRGGPIVWLSEDDARELNIADNDWVEV 1140

Query: 1139 FNSNGALTARAVVSQRVPAGMTMMYHAQERIVNLPGSEITQQRGGIHNSVTRITPKPTHM 1198
            FN+NGALTARAVVSQR+P+GMTMMYHAQER+VNLPGSE+T QRGGIHNSVTR+ PKPTHM
Sbjct: 1141 FNANGALTARAVVSQRIPSGMTMMYHAQERLVNLPGSEVTGQRGGIHNSVTRVCPKPTHM 1200

Query: 1199 IGGYAHLAYGFNYYGTVGSNRDEFVVVRKMKNIDWLDGEGNDQVQESVK 1247
            IGGYA LAYGFNYYGTVGSNRDEFVVVRKM  IDWLD + +D +   V+
Sbjct: 1201 IGGYAQLAYGFNYYGTVGSNRDEFVVVRKMNRIDWLDEDSHDDLSSHVQ 1249