Pairwise Alignments

Query, 578 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

Subject, 580 a.a., potassium/proton antiporter from Pseudomonas simiae WCS417

 Score =  760 bits (1962), Expect = 0.0
 Identities = 380/573 (66%), Positives = 469/573 (81%), Gaps = 3/573 (0%)

Query: 1   MDATTIISLFILGSILVTSSILLSSFSSRLGIPILVIFLAIGMLAGVDGVGGIPFDNYPF 60
           M+ATTI SLF++G++LV++SIL+SS SSRLGIPILVI LA+GM+AGVDG GGI FDNYP 
Sbjct: 1   MNATTINSLFLIGALLVSASILVSSLSSRLGIPILVIILAVGMVAGVDG-GGIIFDNYPT 59

Query: 61  AYMVSNLALAIILLDGGMRTQASSFRVALGPALSLATLGVLITSGLTGMMAAWLFNLDLI 120
           AY+V NLALA+ILLDGG+RT+ +SFRVAL PALSLAT+GVLIT+GLTGM AAWLF+L+LI
Sbjct: 60  AYLVGNLALAVILLDGGLRTRVASFRVALWPALSLATVGVLITTGLTGMAAAWLFDLNLI 119

Query: 121 EGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGSNDPMAVFLTITLIAMIQHHE 180
           +GLLIGAIVGSTDAAAVFSLLGGKGLNERV ++LEIESGSNDPMAVFLT+TLI M+   +
Sbjct: 120 QGLLIGAIVGSTDAAAVFSLLGGKGLNERVTASLEIESGSNDPMAVFLTVTLIDMLASGQ 179

Query: 181 SNISWMFIVDILQQFGLGIVIGLGGGYLLLQMINRIALPAGLYPLLALSGGILIFSLTTA 240
           + + W  +  ++++FG+G V+GLGGG+L+LQM+NRI L  GLYP+L ++GG+ +F++T A
Sbjct: 180 TGLHWSLLTHLVREFGIGGVVGLGGGWLMLQMVNRINLATGLYPILVIAGGLFVFAVTNA 239

Query: 241 LEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAWLAQIAMFLVLGLLVNPSDLLPIAI 300
           L GSG LAVYLCG ++GNRP+R+R+GIL   DG+AWLAQI MFLVLGLLV P DLLPIA+
Sbjct: 240 LHGSGFLAVYLCGLVIGNRPVRSRHGILHMLDGMAWLAQIGMFLVLGLLVTPHDLLPIAL 299

Query: 301 PALILSAWMIFFARPLSVFAGLLPFRGFNLRERVFISWVGLRGAVPIILAVFPMMAGLEN 360
           PAL L+ WMI FARPLSV  GLLPF+ F+ RE+ FI+WVGLRGAVPIILAVFP+MAGL +
Sbjct: 300 PALGLALWMILFARPLSVMVGLLPFKAFHGREKAFIAWVGLRGAVPIILAVFPLMAGLPH 359

Query: 361 ARLFFNVAFFVVLVSLLLQGTSLSWAAKKAKVVVPPVGRPVSRVGLDIHPENPWEQFVYQ 420
           A+L+FN+AFF+VLVSLL+QGTSL W AK  KV VPP   P+SR  L++H  + WE FVY+
Sbjct: 360 AQLYFNLAFFIVLVSLLVQGTSLPWVAKLLKVTVPPDPAPISRAALEVHVTSEWELFVYR 419

Query: 421 LSADKWCVGAALRDLHMPKETRIAALFRDNQLLHPTGSTRLREGDVLCVIGRERDLPALG 480
           L A+KWC+GAALR+L MP+ TRIAALFR  QLLHP+GST L  GD+LCVIG E +LPALG
Sbjct: 420 LGAEKWCIGAALRELKMPEGTRIAALFRGQQLLHPSGSTVLEVGDLLCVIGHEHNLPALG 479

Query: 481 KLFSQSPPVALDQRFFGDFILEASAKYADVALIYGLEDGREYRDKQQTLGEIVQQLLGAA 540
           KLFSQ+P   LD RFFGDF+LE  A+   V+ +YGL+   E  D    L   + Q +G A
Sbjct: 480 KLFSQAPQRGLDLRFFGDFVLEGDAQLGAVSALYGLK--LEGIDPDMPLSSFITQKVGGA 537

Query: 541 PVVGDQVEFAGMIWTVAEKEDNEVLKIGVRVAE 573
           P+VGDQVE+   IWTVA  + N++ K+GVR  E
Sbjct: 538 PIVGDQVEWNNTIWTVAVMDGNKIGKVGVRFPE 570