Pairwise Alignments

Query, 578 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

Subject, 601 a.a., NhaP-type Na+(K+)/H+ antiporter from Pseudomonas putida KT2440

 Score =  104 bits (260), Expect = 9e-27
 Identities = 98/375 (26%), Positives = 168/375 (44%), Gaps = 10/375 (2%)

Query: 29  RLGIPILVIFLAIGMLAGVDGVGGIPFDNY--PFAYMVSNLALAIILLDGGMRTQASSFR 86
           RL +P ++  L  G+LAG   +G +  +    P    + +L++A+IL +G +    S +R
Sbjct: 26  RLKLPAILFLLLAGILAG-PALGWLDPEALFGPLLMPLVSLSVALILFEGSLTLHLSQWR 84

Query: 87  VALGPALSLATLGVLITSGLTGMMAAWLFNLDLIEGLLIGAIVGSTDAAAVFSLLGGKGL 146
                   L T+G L+T  +  +   WL   D    +L G +   T    +  +L     
Sbjct: 85  EIGSVVHRLVTVGALVTWLVIALATHWLLGFDWPLAILFGTLTLVTGPTVIVPMLRVVRP 144

Query: 147 NERVGSTLEIESGSNDPMAVFLTITLIA-MIQHHESNISWMFIVDILQQFGLGIVIGLGG 205
              + + L  E    DP+   L + + + +I   E N     ++        G  +G  G
Sbjct: 145 KAAIANILRWEGIMIDPIGALLAVVVYSFIIASAEGNGLSQSLITFAGVLFCGTTLGAAG 204

Query: 206 GYLLLQMINRIALPAGLYPLLALSGGILIF-SLTTALEGSGILAVYLCGFLLGNRPIRNR 264
           G+LL Q++    LP  L+ L +L+  + IF +    +  SG+LAV + G  L N    + 
Sbjct: 205 GWLLGQIMREQWLPEYLHNLASLAAVLGIFIAANQIMHESGLLAVTVMGMWLANMRGVDV 264

Query: 265 YGILQNFDGLAWLAQIAMFLVLGLLVNPSDLLPIAIPALILSAWMIFFARPLSVFAGLLP 324
             IL   + L+ L    +F++L   ++   LL +    L L   +   ARPL+V+   L 
Sbjct: 265 RQILHFKENLSVLLISGLFILLAARLDLHALLGLGPAVLALLLVIQLLARPLNVWLATLG 324

Query: 325 FRGFNLRERVFISWVGLRG----AVPIILAVFPMMAGLENARLFFNVAFFVVLVSLLLQG 380
               N RER  ++W+  RG    AV  I A+    AG ++A L   + F V++ +++LQ 
Sbjct: 325 -STLNWRERALLAWIAPRGIVAAAVSAIFAIRLHQAGHQDALLLVPLTFAVIIGTVVLQS 383

Query: 381 TSLSWAAKKAKVVVP 395
            +    A+  KV  P
Sbjct: 384 ATARPLARLLKVAEP 398