Pairwise Alignments

Query, 422 a.a., DNA polymerase V subunit UmuC (NCBI) from Escherichia coli BW25113

Subject, 433 a.a., DNA polymerase IV from Xanthobacter sp. DMC5

 Score = 94.4 bits (233), Expect = 6e-24
 Identities = 105/391 (26%), Positives = 162/391 (41%), Gaps = 29/391 (7%)

Query: 6   DVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRC 65
           D +AFYA+ E    PDL   P+++     G V      A+  GV+   P FK   L    
Sbjct: 48  DCDAFYAAVEKRDNPDLAHVPLIIGGGKRGVVSTACYIARIHGVRSAMPMFKALALCP-- 105

Query: 66  GVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR------NCRDLTDF 119
             V    N E Y  +   V + ++ L+P VE  SIDEAF DL+G          R L  F
Sbjct: 106 DAVVLKPNMEKYVKVGREVRARMKALTPLVEPLSIDEAFLDLSGTEALHQASPARTLARF 165

Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179
            R++   V     +TV VG+A  K LAK+A+   K       G  + +      + ++  
Sbjct: 166 ARDVEREV----GITVSVGLAANKFLAKIASDLDKPRGFSVIGQSEAA------EFLAPR 215

Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239
           PV  +WG+G     KL   G  T+ DL   +   + + +     R  R   G    ++E 
Sbjct: 216 PVTFIWGVGAAFGGKLARDGFSTIGDLQRAEPADLARRYGAEGLRLSRLAFGLDTRKVEP 275

Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299
               K  +    +F   I     + Q + + +   +E+L+      R ++  +K++ F L
Sbjct: 276 EREAK-SVSAETTFDRDIGALRPLEQTLYALSEEVSERLKRAGIAGRSVTLKLKSADFRL 334

Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ-L 358
                  + S  L  PT  +   INAA   L      G  ++  GV + D      A   
Sbjct: 335 ------RTRSRTLDAPTCLAAR-INAAAHELLVKETDGTLFRLIGVGVSDLGPIADADPA 387

Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTL 389
           +L D  + R  + +  T MD L AK GRG +
Sbjct: 388 DLVDTTSQRLKATE--TAMDALRAKFGRGAV 416